PDB entry 3god

View 3god on RCSB PDB site
Description: Structural basis for DNase activity of a conserved protein implicated in CRISPR-mediated antiviral defense
Class: immune system
Keywords: CRISPR, CRISPR-associated Cas1, metallonuclease, DNase, prokaryotic immune system, IMMUNE SYSTEM
Deposited on 2009-03-18, released 2009-06-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-06-30, with a file datestamp of 2009-06-26.
Experiment type: XRAY
Resolution: 2.17 Å
R-factor: 0.206
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cas1
    Species: Pseudomonas aeruginosa [TaxId:208963]
    Gene: PA14_33350
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3goda_
  • Chain 'B':
    Compound: Cas1
    Species: Pseudomonas aeruginosa [TaxId:208963]
    Gene: PA14_33350
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3godb_
  • Chain 'C':
    Compound: Cas1
    Species: Pseudomonas aeruginosa [TaxId:208963]
    Gene: PA14_33350
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3godc_
  • Chain 'D':
    Compound: Cas1
    Species: Pseudomonas aeruginosa [TaxId:208963]
    Gene: PA14_33350
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3godd_
  • Heterogens: MN, NA, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3godA (A:)
gsftmddispselktilhskranlyylqhcrvlvnggrveyvtdegrhshywnipiantt
slllgtgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteyl
qrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsara
leqapnhehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylaygl
aatatwvlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqac
ldnlsraqaldfmidtlkdvaqrstvsa

    Sequence, based on observed residues (ATOM records): (download) 
    >3godA (A:)
dispselktilhskranlyylqhcrvlvnggrveyvtdegrhshywnipianttslllgt
gtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteylqrwvgf
wfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsaraleqapn
hehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylayglaatatw
vlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqacldnlsr
aqaldfmidtlkdvaqrstv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3godB (B:)
gsftmddispselktilhskranlyylqhcrvlvnggrveyvtdegrhshywnipiantt
slllgtgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteyl
qrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsara
leqapnhehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylaygl
aatatwvlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqac
ldnlsraqaldfmidtlkdvaqrstvsa

    Sequence, based on observed residues (ATOM records): (download) 
    >3godB (B:)
dispselktilhskranlyylqhcrvlvnggrveyvtdegrhshywnipianttslllgt
gtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteylqrwvgf
wfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsaraleqapn
hehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylayglaatatw
vlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqacldnlsr
aqaldfmidtlkdvaqrst

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3godC (C:)
gsftmddispselktilhskranlyylqhcrvlvnggrveyvtdegrhshywnipiantt
slllgtgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteyl
qrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsara
leqapnhehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylaygl
aatatwvlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqac
ldnlsraqaldfmidtlkdvaqrstvsa

    Sequence, based on observed residues (ATOM records): (download) 
    >3godC (C:)
lhskranlyylqhcrvlvnggrveyvtdegrwnipianttslllgtgtsitqaamrelar
agvlvgfcggggtplfsanevdveteylqrwvgfwfdeekrlvaarhfqrarlerirhsw
ledrvlrdagfavdatalavavedsaraleqapnhehllteearlskrlfklaaqatryg
efvrakrgsggdpanrfldhgnylayglaatatwvlgiphglavlhgktrrgglvfdvad
likdslilpqaflsamrgdeeqdfrqacldnlsraqaldfmidtlkdvaqrst

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3godD (D:)
gsftmddispselktilhskranlyylqhcrvlvnggrveyvtdegrhshywnipiantt
slllgtgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteyl
qrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsara
leqapnhehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylaygl
aatatwvlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqac
ldnlsraqaldfmidtlkdvaqrstvsa

    Sequence, based on observed residues (ATOM records): (download) 
    >3godD (D:)
lktilhskranlyylqhcrvlvnggrveyvtdegrhshywnipianttslllgtgtsitq
aamrelaragvlvgfcggggtplfsanevdveylqrwvgfwfdeekrlvaarhfqrarle
rirhswledrvlrdagfavdatalavavedsaraleqapnhehllteearlskrlfklaa
qatrygefvrakrgsggdpanrfldhgnylayglaatatwvlgiphglavlhgktrrggl
vfdvadlikdslilpqaflsamrgdeeqdfrqacldnlsraqaldfmidtlkdvaqrst