PDB entry 3goc

View 3goc on RCSB PDB site
Description: crystal structure of the endonuclease v (sav1684) from streptomyces avermitilis. northeast structural genomics consortium target svr196
Deposited on 2009-03-18, released 2009-03-31
The last revision was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: endonuclease v
    Species: Streptomyces avermitilis [TaxId:227882]
    Gene: nfi
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: endonuclease v
    Species: Streptomyces avermitilis [TaxId:227882]
    Gene: nfi
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MG, CL, YES, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gocA (A:)
mttvripagwpateeearavqdelrgrvildepgpppgtgrvtgvdvaydderdvvvaaa
vvldaatldvvaeatavgevsfpyvpgllafreiptvlaaldalpcppglivcdgygvah
prrfglashlgvltglptigvaknpftfsyedpgaprgsaapllagadevgralrtqsgv
kpvfvsvghrvdldhacahtlaltpkyripettrradslcrralkeatalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gocA (A:)
ttvripagwpateeearavqdelrgrvildepgpppgtgrvtgvdvaydderdvvvaaav
vldaatldvvaeatavgevsfpyvpgllafreiptvlaaldalpcppglivcdgygvahp
rrfglashlgvltglptigvaknpftfsyedpgaprgsaapllagadevgralrtqsgvk
pvfvsvghrvdldhacahtlaltpkyripettrradslcrralkeata

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3gocB (B:)
mttvripagwpateeearavqdelrgrvildepgpppgtgrvtgvdvaydderdvvvaaa
vvldaatldvvaeatavgevsfpyvpgllafreiptvlaaldalpcppglivcdgygvah
prrfglashlgvltglptigvaknpftfsyedpgaprgsaapllagadevgralrtqsgv
kpvfvsvghrvdldhacahtlaltpkyripettrradslcrralkeatalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gocB (B:)
ttvripagwpateeearavqdelrgrvildepgpppgtgrvtgvdvaydderdvvvaaav
vldaatldvvaeatavgevsfpyvpgllafreiptvlaaldalpcppglivcdgygvahp
rrfglashlgvltglptigvaknpftfsyedpgaprgsaapllagadevgralrtqsgvk
pvfvsvghrvdldhacahtlaltpkyripettrradslcrralkeata