PDB entry 3gnp

View 3gnp on RCSB PDB site
Description: Crystal Structure of a Rice Os3BGlu6 Beta-Glucosidase with Octyl-Beta-D-Thio-Glucoside
Class: hydrolase
Keywords: beta-alpha barrel, glycosidase, hydrolase
Deposited on 2009-03-17, released 2009-07-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.18
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Os03g0212800 protein
    Species: Oryza sativa subsp. japonica [TaxId:39947]
    Gene: LOC_Os03g11420, Os03g0212800, Os3bglu6 locus ID: Os03g0212800
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3gnpa_
  • Heterogens: SOG, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3gnpA (A:)
    sftmaqqsgggltrgsfpegfvfgtasaayqyegavkedgrgqtiwdtfahtfgkitdfs
    nadvavdqyhrfeediqlmadmgmdayrfsiawsriypngvgqvnqagidhynklidall
    akgiqpyvtlyhwdlpqaledkykgwldrqivddfaayaetcfrefgdrvkhwitlneph
    tvaiqgydaglqapgrcsvllhlyckagnsgtepyvvahhfilahaaaasiyrtkykatq
    ngqlgiafdvmwfepmsnttidieaakraqefqlgwfadpfffgdypatmrarvgerlpr
    ftadeaavvkgaldfvginhyttyytrhnntniigtllnntladtgtvslpfkngkpigd
    ransiwlyivprgmrslmnyvkerynsppvyitengmddsnnpfisikdalkdskrikyh
    ndyltnlaasikedgcdvrgyfawslldnwewaagyssrfglyfvdykdnlkrypknsvq
    wfkallkt
    

    Sequence, based on observed residues (ATOM records): (download)
    >3gnpA (A:)
    gltrgsfpegfvfgtasaayqyegavkedgrgqtiwdtfahtfgkitdfsnadvavdqyh
    rfeediqlmadmgmdayrfsiawsriypngvgqvnqagidhynklidallakgiqpyvtl
    yhwdlpqaledkykgwldrqivddfaayaetcfrefgdrvkhwitlnephtvaiqgydag
    lqapgrcsvllhlyckagnsgtepyvvahhfilahaaaasiyrtkykatqngqlgiafdv
    mwfepmsnttidieaakraqefqlgwfadpfffgdypatmrarvgerlprftadeaavvk
    galdfvginhyttyytrhnntniigtllnntladtgtvslpfkngkpigdransiwlyiv
    prgmrslmnyvkerynsppvyitengmddsnnpfisikdalkdskrikyhndyltnlaas
    ikedgcdvrgyfawslldnwewaagyssrfglyfvdykdnlkrypknsvqwfkallkt