PDB entry 3gmj

View 3gmj on RCSB PDB site
Description: Crystal structure of MAD MH2 domain
Class: transcription
Keywords: MH2,SMAD,MAD, Cytoplasm, Developmental protein, Nucleus, Phosphoprotein, Transcription, Transcription regulation, Ubl conjugation
Deposited on 2009-03-14, released 2009-12-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-12-15, with a file datestamp of 2009-12-11.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.181
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein mothers against dpp
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Mad
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42003 (Start-244)
      • see remark 999 (142)
    Domains in SCOPe 2.08: d3gmja_
  • Chain 'B':
    Compound: Protein mothers against dpp
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Mad
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42003 (Start-244)
      • see remark 999 (142)
    Domains in SCOPe 2.08: d3gmjb_
  • Chain 'C':
    Compound: Protein mothers against dpp
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Mad
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42003
      • see remark 999 (142)
    Domains in SCOPe 2.08: d3gmjc_
  • Chain 'D':
    Compound: Protein mothers against dpp
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Mad
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42003 (Start-244)
      • see remark 999 (142)
    Domains in SCOPe 2.08: d3gmjd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gmjA (A:)
gphmdslagtpppayspsedgnsnnpndggqlldaqmgdvaqvsysepafwasiayyeln
crvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstientrrhigkgvhlyyvt
gevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnqefaqllsqsvnngf
eavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqwldkvltqmgsphna
issvs

    Sequence, based on observed residues (ATOM records): (download) 
    >3gmjA (A:)
epafwasiayyelncrvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstient
rrhigkgvhlyyvtgevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnq
efaqllsqsvnngfeavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqw
ldkvltqmgsphnaissvs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gmjB (B:)
gphmdslagtpppayspsedgnsnnpndggqlldaqmgdvaqvsysepafwasiayyeln
crvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstientrrhigkgvhlyyvt
gevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnqefaqllsqsvnngf
eavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqwldkvltqmgsphna
issvs

    Sequence, based on observed residues (ATOM records): (download) 
    >3gmjB (B:)
epafwasiayyelncrvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstient
rrhigkgvhlyyvtgevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnq
efaqllsqsvnngfeavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqw
ldkvltqmgsphnaissvs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gmjC (C:)
gphmdslagtpppayspsedgnsnnpndggqlldaqmgdvaqvsysepafwasiayyeln
crvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstientrrhigkgvhlyyvt
gevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnqefaqllsqsvnngf
eavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqwldkvltqmgsphna
issvs

    Sequence, based on observed residues (ATOM records): (download) 
    >3gmjC (C:)
epafwasiayyelncrvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstient
rrhigkgvhlyyvtgevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnq
efaqllsqsvnngfeavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqw
ldkvltqm

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3gmjD (D:)
gphmdslagtpppayspsedgnsnnpndggqlldaqmgdvaqvsysepafwasiayyeln
crvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstientrrhigkgvhlyyvt
gevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnqefaqllsqsvnngf
eavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqwldkvltqmgsphna
issvs

    Sequence, based on observed residues (ATOM records): (download) 
    >3gmjD (D:)
epafwasiayyelncrvgevfhcnnnsvivdgftnpsnnsdrcclgqlsnvnrnstient
rrhigkgvhlyyvtgevyaeclsdsaifvqsrncnyqhgfhpstvckippgcslkifnnq
efaqllsqsvnngfeavyeltkmctirmsfvkgwgaeyhrqdvtstpcwieihlhgplqw
ldkvltqmgsphnaissvs