PDB entry 3gme

View 3gme on RCSB PDB site
Description: Crystal Structure of Polynucleotide Phosphorylase in complex with RNase E and manganese
Deposited on 2009-03-13, released 2009-06-09
The last revision was dated 2009-06-09, with a file datestamp of 2009-06-05.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.286
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polyribonucleotide nucleotidyltransferase
    Species: Escherichia coli E24377A [TaxId:331111]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Ribonuclease E
    Species: synthetic, synthetic [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gmeA (A:)
mlnpivrkfqygqhtvtletgmmarqataavmvsmddtavfvtvvgqkkakpgqdffplt
vnyqertyaagripgsffrregrpsegetliarlidrpirplfpegfvnevqviatvvsv
npqvnpdivamigasaalslsgipfngpigaarvgyindqyvlnptqdelkeskldlvva
gteaavlmveseaellsedqmlgavvfgheqqqvviqninelvkeagkprwdwqpepvne
alnarvaalaearlsdayritdkqeryaqvdviksetiatllaedetldenelgeilhai
eknvvrsrvlagepridgrekdmirgldvrtgvlprthgsalftrgetqalvtatlgtar
daqvldelmgertdtflfhynfppysvgetgmvgspkrreighgrlakrgvlavmpdmdk
fpytvrvvseitesngsssmasvcgaslalmdagvpikaavagiamglvkegdnyvvlsd
ilgdedhlgdmdfkvagsrdgisalqmdikiegitkeimqvalnqakgarlhilgvmeqa
inaprgdis

    Sequence, based on observed residues (ATOM records):
    >3gmeA (A:)
mlnpivrkfqygqhtvtletgmmarqataavmvsmddtavfvtvvgqkkakpgqdffplt
vnyqertyaagripgsfrpsegetliarlidrpirplfpegfvnevqviatvvsvnpqvn
pdivamigasaalslsgipfngpigaarvgyindqyvlnptqdelkeskldlvvagteaa
vlmveseaellsedqmlgavvfgheqqqvviqninelvkeagkprwdwqpepvnealnar
vtdkqerylhaieknvvrsrvlagepridgrekdmirgldvrtgvlprthgsalftrget
qalvtatlgtdtflfhynfppysvgetgmvgspkrreighgrlakrgvlavmpdmdkfpy
tvrvvseitesngsssmasvcgaslalmdagvpikaavagiamglvkegdnyvvlsdilg
dedhlgdmdfkvagsrdgisalqmdikiegitkeimqvalnqakgarlhilgvmeqaina
pr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3gmeD (D:)
eaprhsdwqrptfafegkgaagghtathhasaaparpqpve

    Sequence, based on observed residues (ATOM records):
    >3gmeD (D:)
gaagghtathhasaaparpqp