PDB entry 3gip

View 3gip on RCSB PDB site
Description: Crystal structure of N-acyl-D-Glutamate Deacylase from Bordetella Bronchiseptica complexed with zinc, acetate and formate ions.
Class: hydrolase
Keywords: N-acyl-D-Glutamate Deacylase, Amidohydrolase family, crystal structure, Hydrolase
Deposited on 2009-03-05, released 2009-09-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-09-01, with a file datestamp of 2009-08-28.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.205
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: N-acyl-D-glutamate deacylase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB3285
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gipa1, d3gipa2, d3gipa3
  • Chain 'B':
    Compound: N-acyl-D-glutamate deacylase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BB3285
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gipb1, d3gipb2, d3gipb3
  • Heterogens: ACY, FMT, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gipA (A:)
mqnaekldfkitggwiidgtgaprrradlgvrdgriaaigelgahparhawdasgkivap
gfidvhghddlmfvekpdlrwktsqgittvvvgncgvsaapaplpgntaaalallgetpl
fadvpayfaaldaqrpminvaalvghanlrlaamrdpqaaptaaeqqamqdmlqaaleag
avgfstglayqpgavaqaaeleglarvaaerrrlhtshirneadgveaaveevlaigrgt
gcatvvshhkcmmpqnwgrsratlanidrareqgvevaldiypypgsstiliperaetid
diritwstphpecsgeyladiaarwgcdkttaarrlapagaiyfamdedevkrifqhpcc
mvgsdglpndarphprlwgsftrvlgryvrearlmtleqavarmtalparvfgfaergvl
qpgawadvvvfdpdtvadratwdeptlasvgiagvlvngaevfpqppadgrpgqvlraga

    Sequence, based on observed residues (ATOM records): (download) 
    >3gipA (A:)
ekldfkitggwiidgtgaprrradlgvrdgriaaigelgahparhawdasgkivapgfid
vhghddlmfvekpdlrwktsqgittvvvgncgvsaapaplpgntaaalallgetplfadv
payfaaldaqrpminvaalvghanlrlaamrdpqaaptaaeqqamqdmlqaaleagavgf
stglayqpgavaqaaeleglarvaaerrrlhtshirneadgveaaveevlaigrgtgcat
vvshhkcmmpqnwgrsratlanidrareqgvevaldiypypgsstiliperaetiddiri
twstphpecsgeyladiaarwgcdkttaarrlapagaiyfamdedevkrifqhpccmvgs
dglpndarphprlwgsftrvlgryvrearlmtleqavarmtalparvfgfaergvlqpga
wadvvvfdpdtvadratwdeptlasvgiagvlvngaevfpqppadgrpgqvlra

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gipB (B:)
mqnaekldfkitggwiidgtgaprrradlgvrdgriaaigelgahparhawdasgkivap
gfidvhghddlmfvekpdlrwktsqgittvvvgncgvsaapaplpgntaaalallgetpl
fadvpayfaaldaqrpminvaalvghanlrlaamrdpqaaptaaeqqamqdmlqaaleag
avgfstglayqpgavaqaaeleglarvaaerrrlhtshirneadgveaaveevlaigrgt
gcatvvshhkcmmpqnwgrsratlanidrareqgvevaldiypypgsstiliperaetid
diritwstphpecsgeyladiaarwgcdkttaarrlapagaiyfamdedevkrifqhpcc
mvgsdglpndarphprlwgsftrvlgryvrearlmtleqavarmtalparvfgfaergvl
qpgawadvvvfdpdtvadratwdeptlasvgiagvlvngaevfpqppadgrpgqvlraga

    Sequence, based on observed residues (ATOM records): (download) 
    >3gipB (B:)
ekldfkitggwiidgtgaprrradlgvrdgriaaigelgahparhawdasgkivapgfid
vhghddlmfvekpdlrwktsqgittvvvgncgvsaapaplpgntaaalallgetplfadv
payfaaldaqrpminvaalvghanlrlaamrdpqaaptaaeqqamqdmlqaaleagavgf
stglayqpgavaqaaeleglarvaaerrrlhtshirneadgveaaveevlaigrgtgcat
vvshhkcmmpqnwgrsratlanidrareqgvevaldiypypgsstiliperaetiddiri
twstphpecsgeyladiaarwgcdkttaarrlapagaiyfamdedevkrifqhpccmvgs
dglpndarphprlwgsftrvlgryvrearlmtleqavarmtalparvfgfaergvlqpga
wadvvvfdpdtvadratwdeptlasvgiagvlvngaevfpqppadgrpgqvlra