PDB entry 3ggo

View 3ggo on RCSB PDB site
Description: Crystal structure of prephenate dehydrogenase from A. aeolicus with HPP and NADH
Deposited on 2009-03-01, released 2009-03-10
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.219
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: prephenate dehydrogenase
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1755, tyrA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: prephenate dehydrogenase
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1755, tyrA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: prephenate dehydrogenase
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1755, tyrA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: prephenate dehydrogenase
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1755, tyrA
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAI, ENO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ggoA (A:)
mgsshhhhhhssglvprgshmkniikilkslsmqnvlivgvgfmggsfakslrrsgfkgk
iygydinpesiskavdlgiidegttsiakvedfspdfvmlsspvrtfreiakklsyilse
datvtdqgsvkgklvydlenilgkrfvgghpiagteksgveysldnlyegkkviltptkk
tdkkrlklvkrvwedvggvveymspelhdyvfgvvshlphavafalvdtlihmstpevdl
fkypgggfkdftriaksdpimwrdiflenkenvmkaiegfekslnhlkelivreaeeelv
eylkevkikrmeid

    Sequence, based on observed residues (ATOM records):
    >3ggoA (A:)
kslsmqnvlivgvgfmggsfakslrrsgfkgkiygydinpesiskavdlgiidegttsia
kvedfspdfvmlsspvrtfreiakklsyilsedatvtdqgsvkgklvydlenilgkrfvg
ghpiagteksgveysldnlyegkkviltptkktdkkrlklvkrvwedvggvveymspelh
dyvfgvvshlphavafalvdtlihmstpevdlfkypgggfkdftriaksdpimwrdifle
nkenvmkaiegfekslnhlkelivreaeeelveylkevkikrmei

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ggoB (B:)
mgsshhhhhhssglvprgshmkniikilkslsmqnvlivgvgfmggsfakslrrsgfkgk
iygydinpesiskavdlgiidegttsiakvedfspdfvmlsspvrtfreiakklsyilse
datvtdqgsvkgklvydlenilgkrfvgghpiagteksgveysldnlyegkkviltptkk
tdkkrlklvkrvwedvggvveymspelhdyvfgvvshlphavafalvdtlihmstpevdl
fkypgggfkdftriaksdpimwrdiflenkenvmkaiegfekslnhlkelivreaeeelv
eylkevkikrmeid

    Sequence, based on observed residues (ATOM records):
    >3ggoB (B:)
lsmqnvlivgvgfmggsfakslrrsgfkgkiygydinpesiskavdlgiidegttsiakv
edfspdfvmlsspvrtfreiakklsyilsedatvtdqgsvkgklvydlenilgkrfvggh
piagteksgveysldnlyegkkviltptkktdkkrlklvkrvwedvggvveymspelhdy
vfgvvshlphavafalvdtlihmstpevdlfkypgggfkdftriaksdpimwrdiflenk
envmkaiegfekslnhlkelivreaeeelveylkevkikrme

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3ggoC (C:)
mgsshhhhhhssglvprgshmkniikilkslsmqnvlivgvgfmggsfakslrrsgfkgk
iygydinpesiskavdlgiidegttsiakvedfspdfvmlsspvrtfreiakklsyilse
datvtdqgsvkgklvydlenilgkrfvgghpiagteksgveysldnlyegkkviltptkk
tdkkrlklvkrvwedvggvveymspelhdyvfgvvshlphavafalvdtlihmstpevdl
fkypgggfkdftriaksdpimwrdiflenkenvmkaiegfekslnhlkelivreaeeelv
eylkevkikrmeid

    Sequence, based on observed residues (ATOM records):
    >3ggoC (C:)
lkslsmqnvlivgvgfmggsfakslrrsgfkgkiygydinpesiskavdlgiidegttsi
akvedfspdfvmlsspvrtfreiakklsyilsedatvtdqgsvkgklvydlenilgkrfv
gghpiagteksgveysldnlyegkkviltptkktdkkrlklvkrvwedvggvveymspel
hdyvfgvvshlphavafalvdtlihmstpevdlfkypgggfkdftriaksdpimwrdifl
enkenvmkaiegfekslnhlkelivreaeeelveylkevki

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3ggoD (D:)
mgsshhhhhhssglvprgshmkniikilkslsmqnvlivgvgfmggsfakslrrsgfkgk
iygydinpesiskavdlgiidegttsiakvedfspdfvmlsspvrtfreiakklsyilse
datvtdqgsvkgklvydlenilgkrfvgghpiagteksgveysldnlyegkkviltptkk
tdkkrlklvkrvwedvggvveymspelhdyvfgvvshlphavafalvdtlihmstpevdl
fkypgggfkdftriaksdpimwrdiflenkenvmkaiegfekslnhlkelivreaeeelv
eylkevkikrmeid

    Sequence, based on observed residues (ATOM records):
    >3ggoD (D:)
slsmqnvlivgvgfmggsfakslrrsgfkgkiygydinpesiskavdlgiidegttsiak
vedfspdfvmlsspvrtfreiakklsyilsedatvtdqgsvkgklvydlenilgkrfvgg
hpiagteksgveysldnlyegkkviltptkktdkkrlklvkrvwedvggvveymspelhd
yvfgvvshlphavafalvdtlihmstpevdlfkypgggfkdftriaksdpimwrdiflen
kenvmkaiegfekslnhlkelivreaeeelveylkevkikrm