PDB entry 3gfg

View 3gfg on RCSB PDB site
Description: structure of putative oxidoreductase yvaa from bacillus subtilis in triclinic form
Deposited on 2009-02-26, released 2009-03-24
The last revision was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2.59 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Uncharacterized oxidoreductase yvaA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: BSU33530, yvaA
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gfgA (A:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgA (A:)
grrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvhele
eitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvl
lsvyhnrrwdndfltikklisegsledintyqvsynryrpevatgtlydlgshiidqtlh
lfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssf
ikygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrk
iaesiregaalpvtaeeginviriieaamesskekrtiml

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3gfgB (B:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgB (B:)
rrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvhelee
itndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvll
svyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegtatgtlydlg
shiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpry
qihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvn
gsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimle

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3gfgC (C:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgC (C:)
rrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvhelee
itndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvll
svyhnrrwdndfltikklisegsledintyqvsynryrpevqarwgtatgtlydlgshii
dqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihg
kdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyl
tyyrkiaesiregaalpvtaeeginviriieaamesskekrtimle

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3gfgD (D:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgD (D:)
tikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvheleeitndp
aielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvllsvyhn
rrwdndfltikklisegsledintyqvsynryrpevqatgtlydlgshiidqtlhlfgmp
kavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssfikygi
dgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrkiaesi
regaalpvtaeeginviriieaamesskekrtiml

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3gfgE (E:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgE (E:)
grrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvhele
eitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvl
lsvyhnrrwdndfltikklisegsledintyqvsynryrpevtatgtlydlgshiidqtl
hlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdss
fikygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyr
kiaesiregaalpvtaeeginviriieaamesskekrtimle

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3gfgF (F:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgF (F:)
rkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvheleei
tndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvlls
vyhnrrwdndfltikklisegsledintyqvsynryrpevqgtatgtlydlgshiidqtl
hlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdss
fikygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyr
kiaesiregaalpvtaeeginviriieaamesskekrtimle

  • Chain 'G':
    Sequence, based on SEQRES records:
    >3gfgG (G:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgG (G:)
rrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvhelee
itndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvll
svyhnrrwdndfltikklisegsledintyqvsynryrpevqatgtlydlgshiidqtlh
lfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssf
ikygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrk
iaesiregaalpvtaeeginviriieaamesskekrtiml

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3gfgH (H:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgH (H:)
kvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvheleeit
ndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvllsv
yhnrrwdndfltikklisegsledintyqvsynryrpevqatgtlydlgshiidqtlhlf
gmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssfik
ygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrkia
esiregaalpvtaeeginviriieaamesskekrtimle

  • Chain 'I':
    Sequence, based on SEQRES records:
    >3gfgI (I:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgI (I:)
dtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvheleeitnd
paielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvllsvyh
nrrwdndfltikklisegsledintyqvsynryrpevatgtlydlgshiidqtlhlfgmp
kavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssfikygi
dgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrkiaesi
regaalpvtaeeginviriieaamesskekrtimle

  • Chain 'J':
    Sequence, based on SEQRES records:
    >3gfgJ (J:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgJ (J:)
dtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvheleeitnd
paielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvllsvyh
nrrwdndfltikklisegsledintyqvsynryrpevqarwatgtlydlgshiidqtlhl
fgmpkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssfi
kygidgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrki
aesiregaalpvtaeeginviriieaamesskekrtimle

  • Chain 'K':
    Sequence, based on SEQRES records:
    >3gfgK (K:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgK (K:)
vdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvheleeitn
dpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvllsvy
hnrrwdndfltikklisegsledintyqvsynryrpevatgtlydlgshiidqtlhlfgm
pkavtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssfikyg
idgqedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrkiaes
iregaalpvtaeeginviriieaamesskekrtimle

  • Chain 'L':
    Sequence, based on SEQRES records:
    >3gfgL (L:)
msltllkgrrkvdtikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpda
evvheleeitndpaielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkra
adekgvllsvyhnrrwdndfltikklisegsledintyqvsynryrpevqarwrekegta
tgtlydlgshiidqtlhlfgmpkavtanvmaqrenaetvdyfhltldygklqailyggsi
vpangpryqihgkdssfikygidgqedalragrkpeddswgadvpefygklttirgsdkk
tetipsvngsyltyyrkiaesiregaalpvtaeeginviriieaamesskekrtimlehe
ghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3gfgL (L:)
tikvgilgyglsgsvfhgplldvldeyqiskimtsrteevkrdfpdaevvheleeitndp
aielvivttpsglhyehtmaciqagkhvvmekpmtataeegetlkraadekgvllsvyhn
rrwdndfltikklisegsledintyqvsynryrpeatgtlydlgshiidqtlhlfgmpka
vtanvmaqrenaetvdyfhltldygklqailyggsivpangpryqihgkdssfikygidg
qedalragrkpeddswgadvpefygklttirgsdkktetipsvngsyltyyrkiaesire
gaalpvtaeeginviriieaamesskekrtimle