PDB entry 3gdp

View 3gdp on RCSB PDB site
Description: hydroxynitrile lyase from almond, monoclinic crystal form
Deposited on 2009-02-24, released 2009-03-24
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.57 Å
R-factor: N/A
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: R-oxynitrile lyase isoenzyme 1
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q945K2 (0-520)
      • see remark 999 (345)
  • Chain 'B':
    Compound: R-oxynitrile lyase isoenzyme 1
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q945K2 (0-520)
      • see remark 999 (345)
  • Heterogens: IPA, FAD, NAG, NDG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >3gdpA (A:)
lattsdhdfsylsfaydatdlelegsydyvivgggtsgcplaatlsekykvlvlergslp
taypnvltadgfvynlqqeddgktpverfvsedgidnvrgrvlggtsiinagvyarants
iysasgvdwdmdlvnqtyewvedtivykpnsqswqsvtktafleagvhpnhgfsldheeg
tritgstfdnkgtrhaadellnkgnsnnlrvgvhasvekiifsnapgltatgviyrdsng
tphqafvrskgevivsagtigtpqllllsgvgpesylsslnipvvlshpyvgqflhdnpr
nfinilppnpieptivtvlgisndfyqcsfsslpfttppfgffpsssyplpnstfahfas
kvagplsygsltlksssnvrvspnvkfnyysnltdlshcvsgmkkigellstdalkpykv
edlpgvegfnilgiplpkdqtddaafetfcresvasywhyhggclvgkvldgdfrvtgin
alrvvdgstfpytpashpqgfylmlgryvgikilqersasd

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >3gdpB (B:)
lattsdhdfsylsfaydatdlelegsydyvivgggtsgcplaatlsekykvlvlergslp
taypnvltadgfvynlqqeddgktpverfvsedgidnvrgrvlggtsiinagvyarants
iysasgvdwdmdlvnqtyewvedtivykpnsqswqsvtktafleagvhpnhgfsldheeg
tritgstfdnkgtrhaadellnkgnsnnlrvgvhasvekiifsnapgltatgviyrdsng
tphqafvrskgevivsagtigtpqllllsgvgpesylsslnipvvlshpyvgqflhdnpr
nfinilppnpieptivtvlgisndfyqcsfsslpfttppfgffpsssyplpnstfahfas
kvagplsygsltlksssnvrvspnvkfnyysnltdlshcvsgmkkigellstdalkpykv
edlpgvegfnilgiplpkdqtddaafetfcresvasywhyhggclvgkvldgdfrvtgin
alrvvdgstfpytpashpqgfylmlgryvgikilqersasd