PDB entry 3gcf

View 3gcf on RCSB PDB site
Description: Terminal oxygenase of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
Class: oxidoreductase
Keywords: rieske oxygenase, 2fe-2s, dioxygenase, carbazole, electron transfer, oxidoreductase
Deposited on 2009-02-22, released 2009-09-15
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-09-15, with a file datestamp of 2009-09-11.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.174
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3gcfa1, d3gcfa2
  • Chain 'B':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3gcfb1, d3gcfb2
  • Chain 'C':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3gcfc1, d3gcfc2
  • Chain 'D':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: Terminal oxygenase component of carbazole 1,9a-dioxygenase
    Species: Nocardioides aromaticivorans [TaxId:200618]
    Gene: carAa
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FE2, FES, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gcfA (A:)
mstsqeisdpaqatssaqvkwpryleatlgfdnhwhpaafdhelaegefvavtmlgekvl
ltrakgevkaiadgcahrgvpfskeplcfkagtvscwyhgwtydlddgrlvdvltspgsp
vigkigikvypvqvaqgvvfvfigdeephalsedlppgfldedthllgirrtvqsnwrlg
vengfdtthifmhrnspwvsgnrlafpygfvpadrdamqvydenwpkgvldrlsenympv
featldgetvlsaeltgeekkvaaqvsvwlpgvlkvdpfpdptliqyefyvpisetqhey
fqvlqrkvegpedvktfevefeerwrddalhgfndddvwareaqqefygerdgwskeqlf
ppdmcivkwrtlasergrgvraarvemshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gcfA (A:)
saqvkwpryleatlgfdnhwhpaafdhelaegefvavtmlgekvlltrakgevkaiadgc
ahrgvpfskeplcfkagtvscwyhgwtydlddgrlvdvltspgspvigkigikvypvqva
qgvvfvfigdeephalsedlppgfldedthllgirrtvqsnwrlgvengfdtthifmhrn
spwvsgnrlafpygfvpadrdamqvydenwpkgvldrlsenympvfeatldgetvlsael
tgeekkvaaqvsvwlpgvlkvdpfpdptliqyefyvpisetqheyfqvlqrkvegpedvk
tfevefeerwrddalhgfndddvwareaqqefygerdgwskeqlfppdmcivkwrtlase
rgrgvra

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gcfB (B:)
mstsqeisdpaqatssaqvkwpryleatlgfdnhwhpaafdhelaegefvavtmlgekvl
ltrakgevkaiadgcahrgvpfskeplcfkagtvscwyhgwtydlddgrlvdvltspgsp
vigkigikvypvqvaqgvvfvfigdeephalsedlppgfldedthllgirrtvqsnwrlg
vengfdtthifmhrnspwvsgnrlafpygfvpadrdamqvydenwpkgvldrlsenympv
featldgetvlsaeltgeekkvaaqvsvwlpgvlkvdpfpdptliqyefyvpisetqhey
fqvlqrkvegpedvktfevefeerwrddalhgfndddvwareaqqefygerdgwskeqlf
ppdmcivkwrtlasergrgvraarvemshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gcfB (B:)
saqvkwpryleatlgfdnhwhpaafdhelaegefvavtmlgekvlltrakgevkaiadgc
ahrgvpfskeplcfkagtvscwyhgwtydlddgrlvdvltspgspvigkigikvypvqva
qgvvfvfigdeephalsedlppgfldedthllgirrtvqsnwrlgvengfdtthifmhrn
spwvsgnrlafpygfvpadrdamqvydenwpkgvldrlsenympvfeatldgetvlsael
tgeekkvaaqvsvwlpgvlkvdpfpdptliqyefyvpisetqheyfqvlqrkvegpedvk
tfevefeerwrddalhgfndddvwareaqqefygerdgwskeqlfppdmcivkwrtlase
rgrgvra

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gcfC (C:)
mstsqeisdpaqatssaqvkwpryleatlgfdnhwhpaafdhelaegefvavtmlgekvl
ltrakgevkaiadgcahrgvpfskeplcfkagtvscwyhgwtydlddgrlvdvltspgsp
vigkigikvypvqvaqgvvfvfigdeephalsedlppgfldedthllgirrtvqsnwrlg
vengfdtthifmhrnspwvsgnrlafpygfvpadrdamqvydenwpkgvldrlsenympv
featldgetvlsaeltgeekkvaaqvsvwlpgvlkvdpfpdptliqyefyvpisetqhey
fqvlqrkvegpedvktfevefeerwrddalhgfndddvwareaqqefygerdgwskeqlf
ppdmcivkwrtlasergrgvraarvemshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gcfC (C:)
saqvkwpryleatlgfdnhwhpaafdhelaegefvavtmlgekvlltrakgevkaiadgc
ahrgvpfskeplcfkagtvscwyhgwtydlddgrlvdvltspgspvigkigikvypvqva
qgvvfvfigdeephalsedlppgfldedthllgirrtvqsnwrlgvengfdtthifmhrn
spwvsgnrlafpygfvpadrdamqvydenwpkgvldrlsenympvfeatldgetvlsael
tgeekkvaaqvsvwlpgvlkvdpfpdptliqyefyvpisetqheyfqvlqrkvegpedvk
tfevefeerwrddalhgfndddvwareaqqefygerdgwskeqlfppdmcivkwrtlase
rgrgvra

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    No sequence available.

  • Chain 'O':
    No sequence available.