PDB entry 3gbb
View 3gbb on RCSB PDB site
Description: X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution
Class: membrane protein
Keywords: ionotropic glutamate receptors, iGluR5, ligand-binding core, weak agonist, MEMBRANE PROTEIN
Deposited on
2009-02-19, released
2009-03-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-09-09, with a file datestamp of
2020-09-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glutamate receptor, ionotropic kainate 1
Species: Rattus norvegicus [TaxId:10116]
Gene: Glur5, Grik1
Database cross-references and differences (RAF-indexed):
- Uniprot P22756 (Start-115)
- see remark 999 (33)
- linker (116-117)
- Uniprot P22756 (118-256)
Domains in SCOPe 2.08: d3gbba_ - Chain 'B':
Compound: Glutamate receptor, ionotropic kainate 1
Species: Rattus norvegicus [TaxId:10116]
Gene: Glur5, Grik1
Database cross-references and differences (RAF-indexed):
- Uniprot P22756 (1-115)
- expression tag (0)
- see remark 999 (33)
- linker (116-117)
- Uniprot P22756 (118-256)
Domains in SCOPe 2.08: d3gbbb1, d3gbbb2 - Heterogens: MS8, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3gbbA (A:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp
Sequence, based on observed residues (ATOM records): (download)
>3gbbA (A:)
nrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgkyg
aqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpids
addlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrvlt
tdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegk
lhmmkekwwrgngcp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3gbbB (B:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp