PDB entry 3gbb

View 3gbb on RCSB PDB site
Description: X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution
Class: membrane protein
Keywords: ionotropic glutamate receptors, iGluR5, ligand-binding core, weak agonist, MEMBRANE PROTEIN
Deposited on 2009-02-19, released 2009-03-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Glur5, Grik1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (Start-115)
      • see remark 999 (33)
      • linker (116-117)
    • Uniprot P22756 (118-256)
    Domains in SCOPe 2.08: d3gbba_
  • Chain 'B':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Glur5, Grik1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (1-115)
      • expression tag (0)
      • see remark 999 (33)
      • linker (116-117)
    • Uniprot P22756 (118-256)
    Domains in SCOPe 2.08: d3gbbb1, d3gbbb2
  • Heterogens: MS8, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3gbbA (A:)
    ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
    ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
    dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
    lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
    gklhmmkekwwrgngcp
    

    Sequence, based on observed residues (ATOM records): (download)
    >3gbbA (A:)
    nrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgkyg
    aqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpids
    addlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrvlt
    tdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegk
    lhmmkekwwrgngcp
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3gbbB (B:)
    ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
    ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
    dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
    lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
    gklhmmkekwwrgngcp