PDB entry 3gba

View 3gba on RCSB PDB site
Description: X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with dysiherbaine at 1.35A resolution
Class: membrane protein
Keywords: ionotropic glutamate receptors, iGluR5, ligand-binding core, agonist, MEMBRANE PROTEIN
Deposited on 2009-02-19, released 2009-03-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-08-16, with a file datestamp of 2017-08-11.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: N/A
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Glur5, Grik1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (1-115)
      • expression tag (0)
      • see remark 999 (33)
      • linker (116-117)
    • Uniprot P22756 (118-256)
    Domains in SCOPe 2.08: d3gbaa1, d3gbaa2
  • Chain 'B':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Glur5, Grik1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (1-115)
      • expression tag (0)
      • see remark 999 (33)
      • linker (116-117)
    • Uniprot P22756 (118-256)
    Domains in SCOPe 2.08: d3gbab1, d3gbab2
  • Chain 'C':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Glur5, Grik1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (Start-115)
      • see remark 999 (33)
      • linker (116-117)
    • Uniprot P22756 (118-256)
    Domains in SCOPe 2.08: d3gbac_
  • Chain 'D':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Glur5, Grik1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (Start-115)
      • see remark 999 (33)
      • linker (116-117)
    • Uniprot P22756 (118-256)
    Domains in SCOPe 2.08: d3gbad_
  • Heterogens: DYH, SO4, GOL, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3gbaA (A:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3gbaB (B:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gbaC (C:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp

    Sequence, based on observed residues (ATOM records): (download) 
    >3gbaC (C:)
tlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgkygaq
ndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpidsad
dlakqkieygavrdgstmtffkkskistyekmwafmssrqsalvknsdegiqrvlttdya
llmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegklhmm
kekwwrgngcp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3gbaD (D:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp

    Sequence, based on observed residues (ATOM records): (download) 
    >3gbaD (D:)
tlivttileepyvmyrksdplygndrfegycldllkelsnilgflydvklvpdgkygaqn
dkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpidsadd
lakqkieygavrdgstmtffkkskistyekmwafmssrqsalvknsdegiqrvlttdyal
lmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegklhmmk
ekwwrgngcp