PDB entry 3gag

View 3gag on RCSB PDB site
Description: Crystal structure of a nitroreductase-like protein (smu.346) from streptococcus mutans at 1.70 A resolution
Class: oxidoreductase
Keywords: Fmn-dependent nitroreductase-like fold, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase
Deposited on 2009-02-17, released 2009-03-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative NADH dehydrogenase, NADPH nitroreductase
    Species: Streptococcus mutans [TaxId:1309]
    Gene: NP_720799.1, SMU_346
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DVW4 (1-205)
      • leader sequence (0)
      • see remark 999 (17)
      • see remark 999 (173)
    Domains in SCOPe 2.08: d3gaga1, d3gaga2
  • Chain 'B':
    Compound: Putative NADH dehydrogenase, NADPH nitroreductase
    Species: Streptococcus mutans [TaxId:1309]
    Gene: NP_720799.1, SMU_346
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DVW4 (1-205)
      • see remark 999 (17)
      • see remark 999 (173)
    Domains in SCOPe 2.08: d3gagb_
  • Chain 'C':
    Compound: Putative NADH dehydrogenase, NADPH nitroreductase
    Species: Streptococcus mutans [TaxId:1309]
    Gene: NP_720799.1, SMU_346
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DVW4 (1-205)
      • leader sequence (0)
      • see remark 999 (17)
      • see remark 999 (173)
    Domains in SCOPe 2.08: d3gagc1, d3gagc2
  • Chain 'D':
    Compound: Putative NADH dehydrogenase, NADPH nitroreductase
    Species: Streptococcus mutans [TaxId:1309]
    Gene: NP_720799.1, SMU_346
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DVW4 (1-205)
      • see remark 999 (17)
      • see remark 999 (173)
    Domains in SCOPe 2.08: d3gagd_
  • Heterogens: FMN, SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3gagA (A:)
gmmndylnfldgrvsvrrfdpdavlpndlikdmlehasyapsgnnfqpwrvvvvknknkq
edlkklaalqpqvatasavfllfgdenaydltwwqefhvqkgiitkdeaaaraerirqyf
dlhpedketqglrldvglfamnlmqvvrvygydsvpmrgvdfdaiktyldmpngwepilm
lpvgkalqagnphvrksvaefaeiie

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gagB (B:)
gmmndylnfldgrvsvrrfdpdavlpndlikdmlehasyapsgnnfqpwrvvvvknknkq
edlkklaalqpqvatasavfllfgdenaydltwwqefhvqkgiitkdeaaaraerirqyf
dlhpedketqglrldvglfamnlmqvvrvygydsvpmrgvdfdaiktyldmpngwepilm
lpvgkalqagnphvrksvaefaeiie

    Sequence, based on observed residues (ATOM records): (download) 
    >3gagB (B:)
mmndylnfldgrvsvrrfdpdavlpndlikdmlehasyapsgnnfqpwrvvvvknknkqe
dlkklaalqpqvatasavfllfgdenaydltwwqefhvqkgiitkdeaaaraerirqyfd
lhpedketqglrldvglfamnlmqvvrvygydsvpmrgvdfdaiktyldmpngwepilml
pvgkalqagnphvrksvaefaeiie

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gagC (C:)
gmmndylnfldgrvsvrrfdpdavlpndlikdmlehasyapsgnnfqpwrvvvvknknkq
edlkklaalqpqvatasavfllfgdenaydltwwqefhvqkgiitkdeaaaraerirqyf
dlhpedketqglrldvglfamnlmqvvrvygydsvpmrgvdfdaiktyldmpngwepilm
lpvgkalqagnphvrksvaefaeiie

    Sequence, based on observed residues (ATOM records): (download) 
    >3gagC (C:)
gmmndylnfldgrvsvrrfdpdavlpndlikdmlehasyapsgnnfqpwrvvvvknknkq
edlkklaalqpqvatasavfllfgdenaydltwwqefhvqkgiiteaaaraerirqyfdl
hpedketqglrldvglfamnlmqvvrvygydsvpmrgvdfdaiktyldmpngwepilmlp
vgkalqagnphvrksvaefaeiie

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3gagD (D:)
gmmndylnfldgrvsvrrfdpdavlpndlikdmlehasyapsgnnfqpwrvvvvknknkq
edlkklaalqpqvatasavfllfgdenaydltwwqefhvqkgiitkdeaaaraerirqyf
dlhpedketqglrldvglfamnlmqvvrvygydsvpmrgvdfdaiktyldmpngwepilm
lpvgkalqagnphvrksvaefaeiie

    Sequence, based on observed residues (ATOM records): (download) 
    >3gagD (D:)
mmndylnfldgrvsvrrfdpdavlpndlikdmlehasyapsgnnfqpwrvvvvknknkqe
dlkklaalqpqvatasavfllfgdenaydltwwqefhvqkgiitkdeaaaraerirqyfd
lhpedketqglrldvglfamnlmqvvrvygydsvpmrgvdfdaiktyldmpngwepilml
pvgkalqagnphvrksvaefaeiie