PDB entry 3g6x

View 3g6x on RCSB PDB site
Description: Ternary complex of DNA Polymerase iota:DNA:dGTP with an abasic site at the templating position
Class: replication/DNA
Keywords: DNA Polymerase, Y-Family, Lesion Bypass, abasic site, ternary complex, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, REPLICATION-DNA COMPLEX
Deposited on 2009-02-09, released 2009-05-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.08 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase iota
    Species: Homo sapiens [TaxId:9606]
    Gene: POLI, RAD30B
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3g6xa1, d3g6xa2
  • Chain 'P':
    Compound: Primer DNA strand
  • Chain 'T':
    Compound: template DNA strand
  • Heterogens: DGT, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3g6xA (A:)
meladvgaaassqgvhdqvlptpnassrvivhvdldcfyaqvemisnpelkdkplgvqqk
ylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvv
erlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqia
aemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeip
gigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppq
sfseedsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryssekhygresr
qcpipshviqklgtgnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlkalntak

    Sequence, based on observed residues (ATOM records): (download) 
    >3g6xA (A:)
assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrda
kekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlq
sdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkl
laklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtf
spkilekelgisvaqriqklsfgednspvilsgppqsfseedsfkkcsseveaknkieel
lasllnrvcqdgrkphtvrliirryssekhygresrqcpipshviqvmtpmvdilmklfr
nmtllsvcfcnlk

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.