PDB entry 3foi

View 3foi on RCSB PDB site
Description: fitting of gp18m crystal structure into 3d cryo-em reconstruction of bacteriophage t4 contracted tail
Deposited on 2008-12-30, released 2009-03-10
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: EM
Resolution: 16 Å
R-factor: N/A
AEROSPACI score: -0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tail sheath protein Gp18
    Species: Enterobacteria phage T4 [TaxId:10665]
    Gene: 18, GB AAA32541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13332 (0-509)
      • see remark 999 (99)
      • see remark 999 (147)
      • see remark 999 (149-150)
      • see remark 999 (300)
      • see remark 999 (398)
      • see remark 999 (453)
      • engineered mutation (509)
  • Chain 'B':
    Compound: Tail sheath protein Gp18
    Species: Enterobacteria phage T4 [TaxId:10665]
    Gene: 18, GB AAA32541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13332 (0-509)
      • see remark 999 (99)
      • see remark 999 (147)
      • see remark 999 (149-150)
      • see remark 999 (300)
      • see remark 999 (398)
      • see remark 999 (453)
      • engineered mutation (509)
  • Chain 'C':
    Compound: Tail sheath protein Gp18
    Species: Enterobacteria phage T4 [TaxId:10665]
    Gene: 18, GB AAA32541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13332 (0-509)
      • see remark 999 (99)
      • see remark 999 (147)
      • see remark 999 (149-150)
      • see remark 999 (300)
      • see remark 999 (398)
      • see remark 999 (453)
      • engineered mutation (509)
  • Chain 'D':
    Compound: Tail sheath protein Gp18
    Species: Enterobacteria phage T4 [TaxId:10665]
    Gene: 18, GB AAA32541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13332 (0-509)
      • see remark 999 (99)
      • see remark 999 (147)
      • see remark 999 (149-150)
      • see remark 999 (300)
      • see remark 999 (398)
      • see remark 999 (453)
      • engineered mutation (509)
  • Chain 'E':
    Compound: Tail sheath protein Gp18
    Species: Enterobacteria phage T4 [TaxId:10665]
    Gene: 18, GB AAA32541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13332 (0-509)
      • see remark 999 (99)
      • see remark 999 (147)
      • see remark 999 (149-150)
      • see remark 999 (300)
      • see remark 999 (398)
      • see remark 999 (453)
      • engineered mutation (509)
  • Chain 'F':
    Compound: Tail sheath protein Gp18
    Species: Enterobacteria phage T4 [TaxId:10665]
    Gene: 18, GB AAA32541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13332 (0-509)
      • see remark 999 (99)
      • see remark 999 (147)
      • see remark 999 (149-150)
      • see remark 999 (300)
      • see remark 999 (398)
      • see remark 999 (453)
      • engineered mutation (509)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3foiA (A:)
    mtllspgielkettvqstvvnnstgtaalagkfqwgpafqikqvtnevdlvntfgqptae
    tadyfmsamnflqygndlrvvravdrdtaknsspiagnieytistpgsnyavgdkitvky
    vsddietegkitevdadgkikkiniptakiiakakevgeyptlgsnwtaeisssssglaa
    vitlgkiitdsgillaeienaeaamtavdfqanlkkygipgvvalypgelgdkieieivs
    kadyakgasallpiypgggtrastakavfgygpqtdsqyaiivrrndaivqsvvlstkrg
    gkdiydsniyiddffakggseyifataqnwpegfsgiltlsgglssnaevtagdlmeawd
    ffadresvdvqlfiagscagesletastvqkhvvsigdvrqdclvlcsppretvvgipvt
    ravdnlvnwrtaagsytdnnfnisstyaaidgnykyqydkyndvnrwvplaadiaglcar
    tdnvsqtwmspagynrgqilnviklaietp
    

    Sequence, based on observed residues (ATOM records):
    >3foiA (A:)
    nnstgtaalagkfqwgpafqikqvtnevdlvntfgqptaetadyfmsamnflqygndlrv
    vravdrdtaknsspiagnieytistpgsnyavgdkitvkyvsddietegkitevdadgki
    kkiniptakiiakakevgeyptlgsnwtaeisssssglaavitlgkiitdsgillaeien
    aeaamtavdfqanlkkygipgvvalypgelgdkieieivskadyakgasallpiypgggt
    rastakavfgygpqtdsqyaiivrrndaivqsvvlstkrggkdiydsniyiddffakggs
    eyifataqnwpegfsgiltlsgglssnaevtagdlmeawdffadresvdvqlfiagscag
    esletastvqkhvvsigdvrqdclvlcsppretvvgipvtravdnlvnwrtaagsytdnn
    fnisstyaaidgnykyqydkyndvnrwvplaadiaglcartdnvrgqilnviklaietp
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3foiB (B:)
    mtllspgielkettvqstvvnnstgtaalagkfqwgpafqikqvtnevdlvntfgqptae
    tadyfmsamnflqygndlrvvravdrdtaknsspiagnieytistpgsnyavgdkitvky
    vsddietegkitevdadgkikkiniptakiiakakevgeyptlgsnwtaeisssssglaa
    vitlgkiitdsgillaeienaeaamtavdfqanlkkygipgvvalypgelgdkieieivs
    kadyakgasallpiypgggtrastakavfgygpqtdsqyaiivrrndaivqsvvlstkrg
    gkdiydsniyiddffakggseyifataqnwpegfsgiltlsgglssnaevtagdlmeawd
    ffadresvdvqlfiagscagesletastvqkhvvsigdvrqdclvlcsppretvvgipvt
    ravdnlvnwrtaagsytdnnfnisstyaaidgnykyqydkyndvnrwvplaadiaglcar
    tdnvsqtwmspagynrgqilnviklaietp
    

    Sequence, based on observed residues (ATOM records):
    >3foiB (B:)
    nnstgtaalagkfqwgpafqikqvtnevdlvntfgqptaetadyfmsamnflqygndlrv
    vravdrdtaknsspiagnieytistpgsnyavgdkitvkyvsddietegkitevdadgki
    kkiniptakiiakakevgeyptlgsnwtaeisssssglaavitlgkiitdsgillaeien
    aeaamtavdfqanlkkygipgvvalypgelgdkieieivskadyakgasallpiypgggt
    rastakavfgygpqtdsqyaiivrrndaivqsvvlstkrggkdiydsniyiddffakggs
    eyifataqnwpegfsgiltlsgglssnaevtagdlmeawdffadresvdvqlfiagscag
    esletastvqkhvvsigdvrqdclvlcsppretvvgipvtravdnlvnwrtaagsytdnn
    fnisstyaaidgnykyqydkyndvnrwvplaadiaglcartdnvrgqilnviklaietp
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3foiC (C:)
    mtllspgielkettvqstvvnnstgtaalagkfqwgpafqikqvtnevdlvntfgqptae
    tadyfmsamnflqygndlrvvravdrdtaknsspiagnieytistpgsnyavgdkitvky
    vsddietegkitevdadgkikkiniptakiiakakevgeyptlgsnwtaeisssssglaa
    vitlgkiitdsgillaeienaeaamtavdfqanlkkygipgvvalypgelgdkieieivs
    kadyakgasallpiypgggtrastakavfgygpqtdsqyaiivrrndaivqsvvlstkrg
    gkdiydsniyiddffakggseyifataqnwpegfsgiltlsgglssnaevtagdlmeawd
    ffadresvdvqlfiagscagesletastvqkhvvsigdvrqdclvlcsppretvvgipvt
    ravdnlvnwrtaagsytdnnfnisstyaaidgnykyqydkyndvnrwvplaadiaglcar
    tdnvsqtwmspagynrgqilnviklaietp
    

    Sequence, based on observed residues (ATOM records):
    >3foiC (C:)
    nnstgtaalagkfqwgpafqikqvtnevdlvntfgqptaetadyfmsamnflqygndlrv
    vravdrdtaknsspiagnieytistpgsnyavgdkitvkyvsddietegkitevdadgki
    kkiniptakiiakakevgeyptlgsnwtaeisssssglaavitlgkiitdsgillaeien
    aeaamtavdfqanlkkygipgvvalypgelgdkieieivskadyakgasallpiypgggt
    rastakavfgygpqtdsqyaiivrrndaivqsvvlstkrggkdiydsniyiddffakggs
    eyifataqnwpegfsgiltlsgglssnaevtagdlmeawdffadresvdvqlfiagscag
    esletastvqkhvvsigdvrqdclvlcsppretvvgipvtravdnlvnwrtaagsytdnn
    fnisstyaaidgnykyqydkyndvnrwvplaadiaglcartdnvrgqilnviklaietp
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3foiD (D:)
    mtllspgielkettvqstvvnnstgtaalagkfqwgpafqikqvtnevdlvntfgqptae
    tadyfmsamnflqygndlrvvravdrdtaknsspiagnieytistpgsnyavgdkitvky
    vsddietegkitevdadgkikkiniptakiiakakevgeyptlgsnwtaeisssssglaa
    vitlgkiitdsgillaeienaeaamtavdfqanlkkygipgvvalypgelgdkieieivs
    kadyakgasallpiypgggtrastakavfgygpqtdsqyaiivrrndaivqsvvlstkrg
    gkdiydsniyiddffakggseyifataqnwpegfsgiltlsgglssnaevtagdlmeawd
    ffadresvdvqlfiagscagesletastvqkhvvsigdvrqdclvlcsppretvvgipvt
    ravdnlvnwrtaagsytdnnfnisstyaaidgnykyqydkyndvnrwvplaadiaglcar
    tdnvsqtwmspagynrgqilnviklaietp
    

    Sequence, based on observed residues (ATOM records):
    >3foiD (D:)
    nnstgtaalagkfqwgpafqikqvtnevdlvntfgqptaetadyfmsamnflqygndlrv
    vravdrdtaknsspiagnieytistpgsnyavgdkitvkyvsddietegkitevdadgki
    kkiniptakiiakakevgeyptlgsnwtaeisssssglaavitlgkiitdsgillaeien
    aeaamtavdfqanlkkygipgvvalypgelgdkieieivskadyakgasallpiypgggt
    rastakavfgygpqtdsqyaiivrrndaivqsvvlstkrggkdiydsniyiddffakggs
    eyifataqnwpegfsgiltlsgglssnaevtagdlmeawdffadresvdvqlfiagscag
    esletastvqkhvvsigdvrqdclvlcsppretvvgipvtravdnlvnwrtaagsytdnn
    fnisstyaaidgnykyqydkyndvnrwvplaadiaglcartdnvrgqilnviklaietp
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3foiE (E:)
    mtllspgielkettvqstvvnnstgtaalagkfqwgpafqikqvtnevdlvntfgqptae
    tadyfmsamnflqygndlrvvravdrdtaknsspiagnieytistpgsnyavgdkitvky
    vsddietegkitevdadgkikkiniptakiiakakevgeyptlgsnwtaeisssssglaa
    vitlgkiitdsgillaeienaeaamtavdfqanlkkygipgvvalypgelgdkieieivs
    kadyakgasallpiypgggtrastakavfgygpqtdsqyaiivrrndaivqsvvlstkrg
    gkdiydsniyiddffakggseyifataqnwpegfsgiltlsgglssnaevtagdlmeawd
    ffadresvdvqlfiagscagesletastvqkhvvsigdvrqdclvlcsppretvvgipvt
    ravdnlvnwrtaagsytdnnfnisstyaaidgnykyqydkyndvnrwvplaadiaglcar
    tdnvsqtwmspagynrgqilnviklaietp
    

    Sequence, based on observed residues (ATOM records):
    >3foiE (E:)
    nnstgtaalagkfqwgpafqikqvtnevdlvntfgqptaetadyfmsamnflqygndlrv
    vravdrdtaknsspiagnieytistpgsnyavgdkitvkyvsddietegkitevdadgki
    kkiniptakiiakakevgeyptlgsnwtaeisssssglaavitlgkiitdsgillaeien
    aeaamtavdfqanlkkygipgvvalypgelgdkieieivskadyakgasallpiypgggt
    rastakavfgygpqtdsqyaiivrrndaivqsvvlstkrggkdiydsniyiddffakggs
    eyifataqnwpegfsgiltlsgglssnaevtagdlmeawdffadresvdvqlfiagscag
    esletastvqkhvvsigdvrqdclvlcsppretvvgipvtravdnlvnwrtaagsytdnn
    fnisstyaaidgnykyqydkyndvnrwvplaadiaglcartdnvrgqilnviklaietp
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3foiF (F:)
    mtllspgielkettvqstvvnnstgtaalagkfqwgpafqikqvtnevdlvntfgqptae
    tadyfmsamnflqygndlrvvravdrdtaknsspiagnieytistpgsnyavgdkitvky
    vsddietegkitevdadgkikkiniptakiiakakevgeyptlgsnwtaeisssssglaa
    vitlgkiitdsgillaeienaeaamtavdfqanlkkygipgvvalypgelgdkieieivs
    kadyakgasallpiypgggtrastakavfgygpqtdsqyaiivrrndaivqsvvlstkrg
    gkdiydsniyiddffakggseyifataqnwpegfsgiltlsgglssnaevtagdlmeawd
    ffadresvdvqlfiagscagesletastvqkhvvsigdvrqdclvlcsppretvvgipvt
    ravdnlvnwrtaagsytdnnfnisstyaaidgnykyqydkyndvnrwvplaadiaglcar
    tdnvsqtwmspagynrgqilnviklaietp
    

    Sequence, based on observed residues (ATOM records):
    >3foiF (F:)
    nnstgtaalagkfqwgpafqikqvtnevdlvntfgqptaetadyfmsamnflqygndlrv
    vravdrdtaknsspiagnieytistpgsnyavgdkitvkyvsddietegkitevdadgki
    kkiniptakiiakakevgeyptlgsnwtaeisssssglaavitlgkiitdsgillaeien
    aeaamtavdfqanlkkygipgvvalypgelgdkieieivskadyakgasallpiypgggt
    rastakavfgygpqtdsqyaiivrrndaivqsvvlstkrggkdiydsniyiddffakggs
    eyifataqnwpegfsgiltlsgglssnaevtagdlmeawdffadresvdvqlfiagscag
    esletastvqkhvvsigdvrqdclvlcsppretvvgipvtravdnlvnwrtaagsytdnn
    fnisstyaaidgnykyqydkyndvnrwvplaadiaglcartdnvrgqilnviklaietp