PDB entry 3fmo
View 3fmo on RCSB PDB site
Description: Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19
Class: Oncoprotein/Hydrolase
Keywords: nuclear porin, nuclear pore complex, nucleocytoplasmic transport, mRNA export, protein interaction, helicase, beta-propeller, DEAD box, Glycoprotein, mRNA transport, Nucleus, Phosphoprotein, Protein transport, Proto-oncogene, Translocation, Transport, ATP-binding, Hydrolase, Membrane, Nucleotide-binding, RNA-binding, Protein transport-Hydrolase COMPLEX, Oncoprotein-Hydrolase COMPLEX
Deposited on
2008-12-22, released
2009-05-19
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 2.51 Å
R-factor: N/A
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Nuclear pore complex protein Nup214
Species: Homo sapiens [TaxId:9606]
Gene: NUP214, CAIN, CAN, KIAA0023
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: ATP-dependent RNA helicase DDX19B
Species: Homo sapiens [TaxId:9606]
Gene: DDX19B, DBP5, DDX19
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3fmob_ - Heterogens: GOL, ADP, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3fmoB (B:)
matdswalavdeqeaaaeslsnlhlkeekikpdtngavvktnanaektdeeekedraaqs
llnklirsnlvdntnqvevlqrdpnsplysvksfeelrlkpqllqgvyamgfnrpskiqe
nalplmlaeppqnliaqsqsgtgktaafvlamlsqvepankypqclclsptyelalqtgk
vieqmgkfypelklayavrgnklergqkiseqivigtpgtvldwcsklkfidpkkikvfv
ldeadvmiatqghqdqsiriqrmlprncqmllfsatfedsvwkfaqkvvpdpnviklkre
Sequence, based on observed residues (ATOM records): (download)
>3fmoB (B:)
nlvdntnqvevlqrdpnsplysvksfeelrlkpqllqgvyamgfnrpskiqenalplmla
eppqnliaqsqsgtgktaafvlamlsqvepankypqclclsptyelalqtgkvieqmgkf
ypelklayavrgnklergqkiseqivigtpgtvldwcsklkfidpkkikvfvldeadvmi
atqghqdqsiriqrmlprncqmllfsatfedsvwkfaqkvvpdpnviklkre