PDB entry 3fk3

View 3fk3 on RCSB PDB site
Description: Structure of the Yeats Domain, Yaf9
Class: transcription
Keywords: beta-sandwich, Activator, Chromatin regulator, DNA damage, DNA repair, Nucleus, Transcription, Transcription regulation
Deposited on 2008-12-15, released 2009-10-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-03-31, with a file datestamp of 2021-03-26.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein AF-9 homolog
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: N1966, YAF9, YNL107W
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53930 (2-163)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d3fk3a1, d3fk3a2
  • Chain 'B':
    Compound: Protein AF-9 homolog
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: N1966, YAF9, YNL107W
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53930 (2-163)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d3fk3b1, d3fk3b2
  • Chain 'C':
    Compound: Protein AF-9 homolog
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: N1966, YAF9, YNL107W
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53930 (2-163)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d3fk3c1, d3fk3c2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3fk3A (A:)
gariktlsvsrpiiygntakkmgsvkppnapaehthlwtifvrgpqnedisyfikkvvfk
lhdtypnpvrsieappfeltetgwgefdinikvyfveeanekvlnfyhrlrlhpyanpvp
nsdngneqnttdhnskdaevssvyfdeivfnepneeffkilmsr

    Sequence, based on observed residues (ATOM records): (download) 
    >3fk3A (A:)
gariktlsvsrpiiygntakkmgsvkppnapaehthlwtifvrgpqnedisyfikkvvfk
lhdtypnpvrsieappfeltetgwgefdinikvyfveeanekvlnfyhrlrlhpevssvy
fdeivfnepneeffkilmsr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3fk3B (B:)
gariktlsvsrpiiygntakkmgsvkppnapaehthlwtifvrgpqnedisyfikkvvfk
lhdtypnpvrsieappfeltetgwgefdinikvyfveeanekvlnfyhrlrlhpyanpvp
nsdngneqnttdhnskdaevssvyfdeivfnepneeffkilmsr

    Sequence, based on observed residues (ATOM records): (download) 
    >3fk3B (B:)
gariktlsvsrpiiygntakkmgsvkppnapaehthlwtifvrgpqnedisyfikkvvfk
lhdtypnpvrsieappfeltetgwgefdinikvyfveeanekvlnfyhrlrlhpevssvy
fdeivfnepneeffkilmsr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3fk3C (C:)
gariktlsvsrpiiygntakkmgsvkppnapaehthlwtifvrgpqnedisyfikkvvfk
lhdtypnpvrsieappfeltetgwgefdinikvyfveeanekvlnfyhrlrlhpyanpvp
nsdngneqnttdhnskdaevssvyfdeivfnepneeffkilmsr

    Sequence, based on observed residues (ATOM records): (download) 
    >3fk3C (C:)
gariktlsvsrpiiygntakkmgsvkppnapaehthlwtifvrgpqnedisyfikkvvfk
lhdtypnpvrsieappfeltetgwgefdinikvyfveeanekvlnfyhrlrlhpevssvy
fdeivfnepneeffkilmsr