PDB entry 3fdq

View 3fdq on RCSB PDB site
Description: Recognition of AT-rich DNA binding sites by the MogR Repressor
Deposited on 2008-11-26, released 2009-06-02
The last revision was dated 2009-06-02, with a file datestamp of 2009-05-29.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.217
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Motility gene repressor mogR
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: lmo0674, mogR
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Motility gene repressor mogR
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: lmo0674, mogR
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 5'-d(*ap*tp*tp*tp*tp*tp*tp*ap*ap*ap*ap*ap*ap*ap*t)-3'
    Species: synthetic, synthetic
  • Chain 'D':
    Compound: 5'-d(*tp*ap*tp*tp*tp*tp*tp*tp*tp*ap*ap*ap*ap*ap*a)-3'
    Species: synthetic, synthetic
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3fdqA (A:)
mpkseirkllqeikkqvdnpgnsstteikkmaseagideqtaeeiyhlltefyqaveehg
giekymhsniswlkielellsacyqiailedmkvldisemlslndlrifpktpsqlqnty
yklkkeliqvedipknkpgrkrktqkntkkektnifgkvvpalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fdqA (A:)
seirkllqeikkqvdnpgnsstteikkmaseagideqtaeeiyhlltefyqaveehggie
kymhsniswlkielellsacyqiailedmkvldisemlslndlrifpktpsqlqntyykl
kkeliqvedipknkpgrkrk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3fdqB (B:)
mpkseirkllqeikkqvdnpgnsstteikkmaseagideqtaeeiyhlltefyqaveehg
giekymhsniswlkielellsacyqiailedmkvldisemlslndlrifpktpsqlqnty
yklkkeliqvedipknkpgrkrktqkntkkektnifgkvvpalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fdqB (B:)
seirkllqeikkqvdnpgnsstteikkmaseagideqtaeeiyhlltefyqaveehggie
kymhsniswlkielellsacyqiailedmkvldisemlslndlrifpktpsqlqntyykl
kkeliqvedipknkpgrkrk

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.