PDB entry 3fd8

View 3fd8 on RCSB PDB site
Description: crystal structure of an oxidoreductase from enterococcus faecalis
Deposited on 2008-11-25, released 2009-02-03
The last revision was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Enterococcus faecalis [TaxId:1351]
    Gene: EF_1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q835X4 (3-End)
      • expression tag (2)
  • Chain 'B':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Enterococcus faecalis [TaxId:1351]
    Gene: EF_1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q835X4 (3-End)
      • expression tag (2)
  • Chain 'C':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Enterococcus faecalis [TaxId:1351]
    Gene: EF_1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q835X4 (3-End)
      • expression tag (2)
  • Chain 'D':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Enterococcus faecalis [TaxId:1351]
    Gene: EF_1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q835X4 (3-End)
      • expression tag (1-2)
  • Chain 'E':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Enterococcus faecalis [TaxId:1351]
    Gene: EF_1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q835X4 (3-350)
      • expression tag (2)
  • Chain 'F':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Enterococcus faecalis [TaxId:1351]
    Gene: EF_1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q835X4 (3-End)
      • expression tag (1-2)
  • Heterogens: PGE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3fd8A (A:)
msltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadln
elltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvv
vmpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgih
lmdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfi
vhgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpv
gdygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlkeneghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fd8A (A:)
ltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadlnel
ltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvvvm
pyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgihlm
drmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfivh
gsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpvgd
ygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlke

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3fd8B (B:)
msltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadln
elltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvv
vmpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgih
lmdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfi
vhgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpv
gdygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlkeneghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fd8B (B:)
ltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadlnel
ltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvvvm
pyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgihlm
drmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfivh
gsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpvgd
ygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlke

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3fd8C (C:)
msltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadln
elltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvv
vmpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgih
lmdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfi
vhgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpv
gdygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlkeneghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fd8C (C:)
ltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadlnel
ltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvvvm
pyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgihlm
drmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfivh
gsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpvgd
ygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3fd8D (D:)
msltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadln
elltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvv
vmpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgih
lmdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfi
vhgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpv
gdygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlkeneghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fd8D (D:)
sltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadlne
lltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvvv
mpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgihl
mdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfiv
hgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpvg
dygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlke

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3fd8E (E:)
msltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadln
elltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvv
vmpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgih
lmdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfi
vhgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpv
gdygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlkeneghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fd8E (E:)
ltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadlnel
ltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvvvm
pyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgihlm
drmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfivh
gsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpvgd
ygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlken

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3fd8F (F:)
msltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadln
elltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvv
vmpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgih
lmdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfi
vhgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpv
gdygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlkeneghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3fd8F (F:)
sltvkmgfigfgksanryhlpyvmiretlevktifdlhvnekaaapfkekgvnftadlne
lltdpeielitictpahthydlakqailagksvivekpfcdtlehaeelfalgqekgvvv
mpyqnrrfdgdylamkqvveqgflgeinevethidyyrpgsiteqgpkengsfyglgihl
mdrmialfgrpdqvtydirnnevseavdnyfdvdlhygsklkvkvktnhsvaspyprfiv
hgsngsfikygedqqendlkagimpdapgfgedspmyygevtyrngngdwikkqiktpvg
dygryydavyetlkngapqlvtkeqaltnieileagflnpspsvyhlke