PDB entry 3f80

View 3f80 on RCSB PDB site
Description: (S)-2-amino-6-nitrohexanoic acid binds to human arginase I through multiple nitro-metal coordination interactions in the binuclear manganese cluster. Resolution 1.60 A.
Class: hydrolase
Keywords: Nitronium group coordination, surface plasmon resonance, Alternative splicing, Arginine metabolism, Cytoplasm, Disease mutation, Hydrolase, Manganese, Metal-binding, Phosphoprotein, Polymorphism, Urea cycle
Deposited on 2008-11-10, released 2008-12-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2008-12-30, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.147
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Arginase-1
    Species: Homo sapiens [TaxId:9606]
    Gene: ARG1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3f80a_
  • Chain 'B':
    Compound: Arginase-1
    Species: Homo sapiens [TaxId:9606]
    Gene: ARG1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3f80b_
  • Heterogens: MN, 6HN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3f80A (A:)
msaksrtigiigapfskgqprggveegptvlrkaglleklkeqecdvkdygdlpfadipn
dspfqivknprsvgkaseqlagkvaevkkngrislvlggdhslaigsisgharvhpdlgv
iwvdahtdintpltttsgnlhgqpvsfllkelkgkipdvpgfswvtpcisakdivyiglr
dvdpgehyilktlgikyfsmtevdrlgigkvmeetlsyllgrkkrpihlsfdvdgldpsf
tpatgtpvvggltyreglyiteeiyktgllsgldimevnpslgktpeevtrtvntavait
lacfglaregnhkpidylnppk

    Sequence, based on observed residues (ATOM records): (download) 
    >3f80A (A:)
rtigiigapfskgqprggveegptvlrkaglleklkeqecdvkdygdlpfadipndspfq
ivknprsvgkaseqlagkvaevkkngrislvlggdhslaigsisgharvhpdlgviwvda
htdintpltttsgnlhgqpvsfllkelkgkipdvpgfswvtpcisakdivyiglrdvdpg
ehyilktlgikyfsmtevdrlgigkvmeetlsyllgrkkrpihlsfdvdgldpsftpatg
tpvvggltyreglyiteeiyktgllsgldimevnpslgktpeevtrtvntavaitlacfg
laregnhkpidyl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3f80B (B:)
msaksrtigiigapfskgqprggveegptvlrkaglleklkeqecdvkdygdlpfadipn
dspfqivknprsvgkaseqlagkvaevkkngrislvlggdhslaigsisgharvhpdlgv
iwvdahtdintpltttsgnlhgqpvsfllkelkgkipdvpgfswvtpcisakdivyiglr
dvdpgehyilktlgikyfsmtevdrlgigkvmeetlsyllgrkkrpihlsfdvdgldpsf
tpatgtpvvggltyreglyiteeiyktgllsgldimevnpslgktpeevtrtvntavait
lacfglaregnhkpidylnppk

    Sequence, based on observed residues (ATOM records): (download) 
    >3f80B (B:)
rtigiigapfskgqprggveegptvlrkaglleklkeqecdvkdygdlpfadipndspfq
ivknprsvgkaseqlagkvaevkkngrislvlggdhslaigsisgharvhpdlgviwvda
htdintpltttsgnlhgqpvsfllkelkgkipdvpgfswvtpcisakdivyiglrdvdpg
ehyilktlgikyfsmtevdrlgigkvmeetlsyllgrkkrpihlsfdvdgldpsftpatg
tpvvggltyreglyiteeiyktgllsgldimevnpslgktpeevtrtvntavaitlacfg
laregnhkpidyl