PDB entry 3f7f

View 3f7f on RCSB PDB site
Description: structure of nup120
Deposited on 2008-11-08, released 2009-08-18
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nucleoporin NUP120
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP120, RAT2, YKL057C, YKL314, YKL313
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35729 (0-728)
      • engineered mutation (206)
  • Chain 'B':
    Compound: Nucleoporin NUP120
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP120, RAT2, YKL057C, YKL314, YKL313
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35729 (0-728)
      • engineered mutation (206)
  • Chain 'C':
    Compound: Nucleoporin NUP120
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP120, RAT2, YKL057C, YKL314, YKL313
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35729 (0-728)
      • engineered mutation (206)
  • Chain 'D':
    Compound: Nucleoporin NUP120
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP120, RAT2, YKL057C, YKL314, YKL313
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35729 (0-728)
      • engineered mutation (206)
  • Heterogens: HG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3f7fA (A:)
maclsridanllqyyekpepnntvdlyvsnnsnnnglkegdksistpvpqpygseysncl
llsnseyicyhfssrstlltfyplsdayhgktinihlpnasmnqrytltiqeveqqllvn
vilkdgsfltlqlplsflfssantlngewfhlqnpydftvrvphflfyvspqfsvvfled
ggllglkkvdgvhyepllfndnsylkcltrffsrssksdydsviscklfherylivltqn
chlkiwdltsftliqdydmvsqsdsdpshfrkveavgeylslynntlvtllplenglfqm
gtllvdssgiltytfqnniptnlsasaiwsivdlvltrplelnveasylnlivlwksgta
sklqilnvndesfknyewiesvnkslvdlqsehdldivtktgdvergfcnlksrygtqif
eraqqilsenkiimahnedeeylanletilrdvktafneassitlygdeiilvncfqpyn
hslyklnttvenwfynmhsetdgselfkylrtlngfastlsndvlrsiskkfldiitgel
pdsmttvekftdifknclenqfeitnlkilfdelnsfdipvvlndlinnqmkpgifwkkd
fisaikfdgftsiisleslhqllsihyritlqvlltfvlfdldteifgqhistlldlhyk
qflllnlyrqdkcllaevllkdssefsfgvkffnygqliayidslnsnvynasitensff
mtffrsyii

    Sequence, based on observed residues (ATOM records):
    >3f7fA (A:)
maclsridanllqyyekpepnntvdlyvsgseysnclllsnseyicyhfssrstlltfyp
lsdayhgktinihlpnasmnqrytltiqeveqqllvnvilkdgsfltlqlplsflfssan
tlngewfhlqnpydftvrvphflfyvspqfsvvfledggllglkkvdgvhyepllfndns
ylkcltrffsrssksdydsviscklfherylivltqnchlkiwdltsftliqdydmvsqs
dsdpshfrkveavgeylslynntlvtllplenglfqmgtllvltytfqnniptnlsasai
wsivdlvltrplelnveasylnlivlwksgtasklqilnvndesfknyewiesvnkslvd
lqsehdldivtktgdvergfcnlksrygtqiferaqqilsenkiimahnedeeylanlet
ilrdvktafneassitlygdeiilvncfqpynhslyklnttvenwfynmhsetdgselfk
ylrtlngfastlsndvlrsiskkfldiitgelpdsmttvekftdifknclenqfeitnlk
ilfdelnsfdipvvlndlinnqmkpgifwkkdfisaikfdgftsiisleslhqllsihyr
itlqvlltfvlfdldteifgqhistlldlhykqflllnlyrqdkcllaevllkdssefsf
gvkffnygqliayidslnsnvynasitensffmtffrsyii

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3f7fB (B:)
maclsridanllqyyekpepnntvdlyvsnnsnnnglkegdksistpvpqpygseysncl
llsnseyicyhfssrstlltfyplsdayhgktinihlpnasmnqrytltiqeveqqllvn
vilkdgsfltlqlplsflfssantlngewfhlqnpydftvrvphflfyvspqfsvvfled
ggllglkkvdgvhyepllfndnsylkcltrffsrssksdydsviscklfherylivltqn
chlkiwdltsftliqdydmvsqsdsdpshfrkveavgeylslynntlvtllplenglfqm
gtllvdssgiltytfqnniptnlsasaiwsivdlvltrplelnveasylnlivlwksgta
sklqilnvndesfknyewiesvnkslvdlqsehdldivtktgdvergfcnlksrygtqif
eraqqilsenkiimahnedeeylanletilrdvktafneassitlygdeiilvncfqpyn
hslyklnttvenwfynmhsetdgselfkylrtlngfastlsndvlrsiskkfldiitgel
pdsmttvekftdifknclenqfeitnlkilfdelnsfdipvvlndlinnqmkpgifwkkd
fisaikfdgftsiisleslhqllsihyritlqvlltfvlfdldteifgqhistlldlhyk
qflllnlyrqdkcllaevllkdssefsfgvkffnygqliayidslnsnvynasitensff
mtffrsyii

    Sequence, based on observed residues (ATOM records):
    >3f7fB (B:)
maclsridanllqyyekpepnntvdlyvsgseysnclllsnseyicyhfssrstlltfyp
lsdayhgktinihlpnasmnqrytltiqeveqqllvnvilkdgsfltlqlplsflfssan
tlngewfhlqnpydftvrvphflfyvspqfsvvfledggllglkkvdgvhyepllfndns
ylkcltrffsrssksdydsviscklfherylivltqnchlkiwdltsftliqdydmvsqs
dsdpshfrkveavgeylslynntlvtllplenglfqmgtllvltytfqnniptnlsasai
wsivdlvltrplelnveasylnlivlwksgtasklqilnvndesfknyewiesvnkslvd
lqsehdldivtktgdvergfcnlksrygtqiferaqqilsenkiimahnedeeylanlet
ilrdvktafneassitlygdeiilvncfqpynhslyklnttvenwfynmhsetdgselfk
ylrtlngfastlsndvlrsiskkfldiitgelpdsmttvekftdifknclenqfeitnlk
ilfdelnsfdipvvlndlinnqmkpgifwkkdfisaikfdgftsiisleslhqllsihyr
itlqvlltfvlfdldteifgqhistlldlhykqflllnlyrqdkcllaevllkdssefsf
gvkffnygqliayidslnsnvynasitensffmtffrsyii

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3f7fC (C:)
maclsridanllqyyekpepnntvdlyvsnnsnnnglkegdksistpvpqpygseysncl
llsnseyicyhfssrstlltfyplsdayhgktinihlpnasmnqrytltiqeveqqllvn
vilkdgsfltlqlplsflfssantlngewfhlqnpydftvrvphflfyvspqfsvvfled
ggllglkkvdgvhyepllfndnsylkcltrffsrssksdydsviscklfherylivltqn
chlkiwdltsftliqdydmvsqsdsdpshfrkveavgeylslynntlvtllplenglfqm
gtllvdssgiltytfqnniptnlsasaiwsivdlvltrplelnveasylnlivlwksgta
sklqilnvndesfknyewiesvnkslvdlqsehdldivtktgdvergfcnlksrygtqif
eraqqilsenkiimahnedeeylanletilrdvktafneassitlygdeiilvncfqpyn
hslyklnttvenwfynmhsetdgselfkylrtlngfastlsndvlrsiskkfldiitgel
pdsmttvekftdifknclenqfeitnlkilfdelnsfdipvvlndlinnqmkpgifwkkd
fisaikfdgftsiisleslhqllsihyritlqvlltfvlfdldteifgqhistlldlhyk
qflllnlyrqdkcllaevllkdssefsfgvkffnygqliayidslnsnvynasitensff
mtffrsyii

    Sequence, based on observed residues (ATOM records):
    >3f7fC (C:)
maclsridanllqyyekpepnntvdlyvsgseysnclllsnseyicyhfssrstlltfyp
lsdayhgktinihlpnasmnqrytltiqeveqqllvnvilkdgsfltlqlplsflfssan
tlngewfhlqnpydftvrvphflfyvspqfsvvfledggllglkkvdgvhyepllfndns
ylkcltrffsrssksdydsviscklfherylivltqnchlkiwdltsftliqdydmvsqs
dsdpshfrkveavgeylslynntlvtllplenglfqmgtllvltytfqnniptnlsasai
wsivdlvltrplelnveasylnlivlwksgtasklqilnvndesfknyewiesvnkslvd
lqsehdldivtktgdvergfcnlksrygtqiferaqqilsenkiimahnedeeylanlet
ilrdvktafneassitlygdeiilvncfqpynhslyklnttvenwfynmhsetdgselfk
ylrtlngfastlsndvlrsiskkfldiitgelpdsmttvekftdifknclenqfeitnlk
ilfdelnsfdipvvlndlinnqmkpgifwkkdfisaikfdgftsiisleslhqllsihyr
itlqvlltfvlfdldteifgqhistlldlhykqflllnlyrqdkcllaevllkdssefsf
gvkffnygqliayidslnsnvynasitensffmtffrsyii

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3f7fD (D:)
maclsridanllqyyekpepnntvdlyvsnnsnnnglkegdksistpvpqpygseysncl
llsnseyicyhfssrstlltfyplsdayhgktinihlpnasmnqrytltiqeveqqllvn
vilkdgsfltlqlplsflfssantlngewfhlqnpydftvrvphflfyvspqfsvvfled
ggllglkkvdgvhyepllfndnsylkcltrffsrssksdydsviscklfherylivltqn
chlkiwdltsftliqdydmvsqsdsdpshfrkveavgeylslynntlvtllplenglfqm
gtllvdssgiltytfqnniptnlsasaiwsivdlvltrplelnveasylnlivlwksgta
sklqilnvndesfknyewiesvnkslvdlqsehdldivtktgdvergfcnlksrygtqif
eraqqilsenkiimahnedeeylanletilrdvktafneassitlygdeiilvncfqpyn
hslyklnttvenwfynmhsetdgselfkylrtlngfastlsndvlrsiskkfldiitgel
pdsmttvekftdifknclenqfeitnlkilfdelnsfdipvvlndlinnqmkpgifwkkd
fisaikfdgftsiisleslhqllsihyritlqvlltfvlfdldteifgqhistlldlhyk
qflllnlyrqdkcllaevllkdssefsfgvkffnygqliayidslnsnvynasitensff
mtffrsyii

    Sequence, based on observed residues (ATOM records):
    >3f7fD (D:)
maclsridanllqyyekpepnntvdlyvsgseysnclllsnseyicyhfssrstlltfyp
lsdayhgktinihlpnasmnqrytltiqeveqqllvnvilkdgsfltlqlplsflfssan
tlngewfhlqnpydftvrvphflfyvspqfsvvfledggllglkkvdgvhyepllfndns
ylkcltrffsrssksdydsviscklfherylivltqnchlkiwdltsftliqdydmvsqs
dsdpshfrkveavgeylslynntlvtllplenglfqmgtllvltytfqnniptnlsasai
wsivdlvltrplelnveasylnlivlwksgtasklqilnvndesfknyewiesvnkslvd
lqsehdldivtktgdvergfcnlksrygtqiferaqqilsenkiimahnedeeylanlet
ilrdvktafneassitlygdeiilvncfqpynhslyklnttvenwfynmhsetdgselfk
ylrtlngfastlsndvlrsiskkfldiitgelpdsmttvekftdifknclenqfeitnlk
ilfdelnsfdipvvlndlinnqmkpgifwkkdfisaikfdgftsiisleslhqllsihyr
itlqvlltfvlfdldteifgqhistlldlhykqflllnlyrqdkcllaevllkdssefsf
gvkffnygqliayidslnsnvynasitensffmtffrsyii