PDB entry 3f4d

View 3f4d on RCSB PDB site
Description: Crystal structure of organophosphorus hydrolase from Geobacillus stearothermophilus strain 10
Class: hydrolase
Keywords: alpha-beta barrel, amidohydrolase, binuclear metal enzyme, hydrolase
Deposited on 2008-10-31, released 2009-08-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.36 Å
R-factor: 0.17
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Organophosphorus hydrolase
    Species: Geobacillus stearothermophilus [TaxId:272567]
    Database cross-references and differences (RAF-indexed):
    • PDB 3F4D (Start-325)
    Domains in SCOPe 2.08: d3f4da1, d3f4da2
  • Chain 'B':
    Compound: Organophosphorus hydrolase
    Species: Geobacillus stearothermophilus [TaxId:272567]
    Database cross-references and differences (RAF-indexed):
    • PDB 3F4D (Start-325)
    Domains in SCOPe 2.08: d3f4db1, d3f4db2
  • Heterogens: CO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3f4dA (A:)
maktvetvlgpvpveqlgktlihehflfgypgfqgdvtrgtfredealrvaveaaekmkr
hgiqtvvdptpndcgrnpaflrrvaeetglniicatgyyyegegappyfqfrrllgtaed
diydmfmaeltegiadtgikagviklasskgriteyekmffraaaraqketgaviithtq
egtmgpeqaayllehgadpkkivighmcgntdpdyhrktlaygvyiafdrfgiqgmvgap
tdeervrtllallrdgyekqimlshdtvnvwlgrpftlpepfaemmknwhvehlfvniip
alknegirdevleqmfignpaalfsahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3f4dA (A:)
ktvetvlgpvpveqlgktlihehflfgypgfqgdvtrgtfredealrvaveaaekmkrhg
iqtvvdptpndcgrnpaflrrvaeetglniicatgyyyegegappyfqfrrllgtaeddi
ydmfmaeltegiadtgikagviklasskgriteyekmffraaaraqketgaviithtqeg
tmgpeqaayllehgadpkkivighmcgntdpdyhrktlaygvyiafdrfgiqgmvgaptd
eervrtllallrdgyekqimlshdtvnvwlgrpftlpepfaemmknwhvehlfvniipal
knegirdevleqmfignpaalfsa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3f4dB (B:)
maktvetvlgpvpveqlgktlihehflfgypgfqgdvtrgtfredealrvaveaaekmkr
hgiqtvvdptpndcgrnpaflrrvaeetglniicatgyyyegegappyfqfrrllgtaed
diydmfmaeltegiadtgikagviklasskgriteyekmffraaaraqketgaviithtq
egtmgpeqaayllehgadpkkivighmcgntdpdyhrktlaygvyiafdrfgiqgmvgap
tdeervrtllallrdgyekqimlshdtvnvwlgrpftlpepfaemmknwhvehlfvniip
alknegirdevleqmfignpaalfsahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3f4dB (B:)
ktvetvlgpvpveqlgktlihehflfgypgfqgdvtrgtfredealrvaveaaekmkrhg
iqtvvdptpndcgrnpaflrrvaeetglniicatgyyyegegappyfqfrrllgtaeddi
ydmfmaeltegiadtgikagviklasskgriteyekmffraaaraqketgaviithtqeg
tmgpeqaayllehgadpkkivighmcgntdpdyhrktlaygvyiafdrfgiqgmvgaptd
eervrtllallrdgyekqimlshdtvnvwlgrpftlpepfaemmknwhvehlfvniipal
knegirdevleqmfignpaalfsa