PDB entry 3f3g

View 3f3g on RCSB PDB site
Description: crystal structure of the nucleoporin pair nup85-seh1, space group p212121
Deposited on 2008-10-30, released 2009-04-07
The last revision was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 3.75 Å
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nucleoporin SEH1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SEH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Nucleoporin SEH1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SEH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Nucleoporin NUP85
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP85, RAT9
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Nucleoporin NUP85
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP85, RAT9
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Nucleoporin SEH1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SEH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Nucleoporin SEH1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SEH1
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Nucleoporin NUP85
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP85, RAT9
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Nucleoporin NUP85
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NUP85, RAT9
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3f3gA (A:)
phmqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssi
vaidwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfap
ahlglklaclgndgilrlydalepsdlrswtltsemkvlsippanhlqsdfclswcpsrf
speklavsaleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdg
ririfkiteklsplaseesltnsnmfdnsadvdmdaqgrsdsnteekaelqsnlqvells
ehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvitaqq

    Sequence, based on observed residues (ATOM records):
    >3f3gA (A:)
mqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssiva
idwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfapah
lglklaclgndgilrlydalepsdlrswtltsemkvlsipsdfclswcpsrfspeklavs
aleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdgririfkit
eksnlqvellsehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvita

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3f3gB (B:)
phmqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssi
vaidwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfap
ahlglklaclgndgilrlydalepsdlrswtltsemkvlsippanhlqsdfclswcpsrf
speklavsaleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdg
ririfkiteklsplaseesltnsnmfdnsadvdmdaqgrsdsnteekaelqsnlqvells
ehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvitaqq

    Sequence, based on observed residues (ATOM records):
    >3f3gB (B:)
mqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssiva
idwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfapah
lglklaclgndgilrlydalepsdlrswtltsemkvlsipsdfclswcpsrfspeklavs
aleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdgririfkit
eksnlqvellsehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvita

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3f3gC (C:)
mtiddsnrllmdvdqfdflddgtaqlsnnktdeeeqlykrdpvsgailvpmtvndqpiek
ngdkmplkfklgplsyqnmafitakdkyklypvriprldtskefsayvsglfeiyrdlgd
drvfnvptigvvnsnfakehnatvnlameailnelevfigrvkdqdgrvnrfyeleeslt
vlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqvfsvkdstagkkvf
etqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsdsiellkqypkdss
stfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkilqysrtwyesfcgf
llyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilpvmesldsctaaft
amiceakglienifegeknsddysnednemledlfsyrngmasymlnsfafelcslgdke
lwpvaiglialsatgtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyt
tlgnqmlsahniiesianfsragkyelvks

    Sequence, based on observed residues (ATOM records):
    >3f3gC (C:)
rdpvsgailvpmtvndqpiekngdkmplkfklgplsyqnmafitakdkyklypvriprld
tskefsayvsglfeiyrdlgddrvfnvfakehnatvnlameailnelevfigrvkdqdgr
vnrfyeleesltvlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqvf
svkdstagkkvfetqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsds
iellkqypkdssstfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkilq
ysrtwyesfcgfllyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilpv
mesldsctaaftamiceakgliedlfsyrngmasymlnsfafelcslgdkelwpvaigli
alsatgtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyttlgnqmlsa
hniiesianfsr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3f3gD (D:)
mtiddsnrllmdvdqfdflddgtaqlsnnktdeeeqlykrdpvsgailvpmtvndqpiek
ngdkmplkfklgplsyqnmafitakdkyklypvriprldtskefsayvsglfeiyrdlgd
drvfnvptigvvnsnfakehnatvnlameailnelevfigrvkdqdgrvnrfyeleeslt
vlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqvfsvkdstagkkvf
etqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsdsiellkqypkdss
stfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkilqysrtwyesfcgf
llyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilpvmesldsctaaft
amiceakglienifegeknsddysnednemledlfsyrngmasymlnsfafelcslgdke
lwpvaiglialsatgtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyt
tlgnqmlsahniiesianfsragkyelvks

    Sequence, based on observed residues (ATOM records):
    >3f3gD (D:)
krdpvsgailvpmtvndqpiekngdkmplkfklgplsyqnmafitakdkyklypvriprl
dtskefsayvsglfeiyrdlgddrvfnvfakehnatvnlameailnelevfigrvkdqdg
rvnrfyeleesltvlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqv
fsgkkvfetqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsdsiellk
qypkdssstfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkilqysrtw
yesfcgfllyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilpvmesld
sctaaftamiceakgliedlfsyrngmasymlnsfafelcslgdkelwpvaiglialsat
gtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyttlgnqmlsahniie

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3f3gE (E:)
phmqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssi
vaidwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfap
ahlglklaclgndgilrlydalepsdlrswtltsemkvlsippanhlqsdfclswcpsrf
speklavsaleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdg
ririfkiteklsplaseesltnsnmfdnsadvdmdaqgrsdsnteekaelqsnlqvells
ehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvitaqq

    Sequence, based on observed residues (ATOM records):
    >3f3gE (E:)
mqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssiva
idwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfapah
lglklaclgndgilrlydalepsdlrswtltsemkvlsipsdfclswcpsrfspeklavs
aleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdgririfkit
eksnlqvellsehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvita

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3f3gF (F:)
phmqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssi
vaidwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfap
ahlglklaclgndgilrlydalepsdlrswtltsemkvlsippanhlqsdfclswcpsrf
speklavsaleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdg
ririfkiteklsplaseesltnsnmfdnsadvdmdaqgrsdsnteekaelqsnlqvells
ehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvitaqq

    Sequence, based on observed residues (ATOM records):
    >3f3gF (F:)
mqpfdsghddlvhdvvydfygrhvatcssdqhikvfkldkdtsnwelsdswrahdssiva
idwaspeygriiasasydktvklweedpdqeecsgrrwnklctlndskgslysvkfapah
lglklaclgndgilrlydalepsdlrswtltsemkvlsipsdfclswcpsrfspeklavs
aleqaiiyqrgkdgklhvaaklpghkslirsiswapsigrwyqliatgckdgririfkit
eksnlqvellsehddhngevwsvswnltgtilssagddgkvrlwkatysnefkcmsvita

  • Chain 'G':
    Sequence, based on SEQRES records:
    >3f3gG (G:)
mtiddsnrllmdvdqfdflddgtaqlsnnktdeeeqlykrdpvsgailvpmtvndqpiek
ngdkmplkfklgplsyqnmafitakdkyklypvriprldtskefsayvsglfeiyrdlgd
drvfnvptigvvnsnfakehnatvnlameailnelevfigrvkdqdgrvnrfyeleeslt
vlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqvfsvkdstagkkvf
etqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsdsiellkqypkdss
stfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkilqysrtwyesfcgf
llyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilpvmesldsctaaft
amiceakglienifegeknsddysnednemledlfsyrngmasymlnsfafelcslgdke
lwpvaiglialsatgtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyt
tlgnqmlsahniiesianfsragkyelvks

    Sequence, based on observed residues (ATOM records):
    >3f3gG (G:)
krdpvsgailvpmtvndqpiekngdkmplkfklgplsyqnmafitakdkyklypvriprl
dtskefsayvsglfeiyrdlgddrvfnvfakehnatvnlameailnelevfigrvkdqdg
rvnrfyeleesltvlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqv
fsagkkvfetqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsdsiell
kqypkdssstfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkilqysrt
wyesfcgfllyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilpvmesl
dsctaaftamiceakgliledlfsyrngmasymlnsfafelcslgdkelwpvaiglials
atgtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyttlgnqmlsahni
ie

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3f3gH (H:)
mtiddsnrllmdvdqfdflddgtaqlsnnktdeeeqlykrdpvsgailvpmtvndqpiek
ngdkmplkfklgplsyqnmafitakdkyklypvriprldtskefsayvsglfeiyrdlgd
drvfnvptigvvnsnfakehnatvnlameailnelevfigrvkdqdgrvnrfyeleeslt
vlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqvfsvkdstagkkvf
etqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsdsiellkqypkdss
stfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkilqysrtwyesfcgf
llyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilpvmesldsctaaft
amiceakglienifegeknsddysnednemledlfsyrngmasymlnsfafelcslgdke
lwpvaiglialsatgtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyt
tlgnqmlsahniiesianfsragkyelvks

    Sequence, based on observed residues (ATOM records):
    >3f3gH (H:)
krdpvsgailvpmtvndqpiekngdkmplkfklgplsyqnmafitakdkyklypvriprl
dtskefsayvsglfeiyrdlgddrvfnvfakehnatvnlameailnelevfigrvkdqdg
rvnrfyeleesltvlnclrtmyfildgqdveenrsefiesllnwinrsdgepdeeyieqv
fsvkdstagkkvfetqyfwkllnqlvlrgllsqaigciersdllpylsdtcavsfdavsd
siellkqypkdssstfrewknlvlklsqafgssatdisgelrdyiedfllviggnqrkil
qysrtwyesfcgfllyyipslelsaeylqmsleanvvditndweqpcvdiisgkihsilp
vmesldsctaaftamiceakgliedlfsyrngmasymlnsfafelcslgdkelwpvaigl
ialsatgtrsakkmviaellphypfvtnddiewmlsicvewrlpeiakeiyttlgnqmls
ahniiesianfsr