PDB entry 3f0e

View 3f0e on RCSB PDB site
Description: Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei
Class: lyase
Keywords: NIAID, SSGCID, Burkholderia pseudomallei, Isoprene biosynthesis, Lyase, Metal-binding, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease
Deposited on 2008-10-24, released 2008-11-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-10-30, with a file datestamp of 2013-10-25.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.207
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
    Species: Burkholderia pseudomallei [TaxId:28450]
    Gene: ispF, mecS, BPSL2098
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3f0ea_
  • Chain 'B':
    Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
    Species: Burkholderia pseudomallei [TaxId:28450]
    Gene: ispF, mecS, BPSL2098
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3f0eb_
  • Chain 'C':
    Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
    Species: Burkholderia pseudomallei [TaxId:28450]
    Gene: ispF, mecS, BPSL2098
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3f0ec_
  • Heterogens: MG, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3f0eA (A:)
mahhhhhhmgtleaqtqgpgsmdfrigqgydvhqlvpgrpliiggvtipyergllghsda
dvllhaitdalfgaaalgdigrhfsdtdprfkgadsrallrecasrvaqagfairnvdst
iiaqapklaphidamraniaadldlpldrvnvkaktneklgylgrgegieaqaaalvvre
aaa

    Sequence, based on observed residues (ATOM records): (download) 
    >3f0eA (A:)
mdfrigqgydvhqlvpgrpliiggvtipyergllghsdadvllhaitdalfgaaalgdig
rhfsdtdprfkgadsrallrecasrvaqagfairnvdstiiaqapklaphidamraniaa
dldlpldrvnvkaktneklgylgrgegieaqaaalvvr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3f0eB (B:)
mahhhhhhmgtleaqtqgpgsmdfrigqgydvhqlvpgrpliiggvtipyergllghsda
dvllhaitdalfgaaalgdigrhfsdtdprfkgadsrallrecasrvaqagfairnvdst
iiaqapklaphidamraniaadldlpldrvnvkaktneklgylgrgegieaqaaalvvre
aaa

    Sequence, based on observed residues (ATOM records): (download) 
    >3f0eB (B:)
mdfrigqgydvhqlvpgrpliiggvtipyerglldadvllhaitdalfgaaalgdigrhf
adsrallrecasrvaqagfairnvdstiiaqapklaphidamraniaadldlpldrvnvk
aktneklgylgrgegieaqaaalvvr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3f0eC (C:)
mahhhhhhmgtleaqtqgpgsmdfrigqgydvhqlvpgrpliiggvtipyergllghsda
dvllhaitdalfgaaalgdigrhfsdtdprfkgadsrallrecasrvaqagfairnvdst
iiaqapklaphidamraniaadldlpldrvnvkaktneklgylgrgegieaqaaalvvre
aaa

    Sequence, based on observed residues (ATOM records): (download) 
    >3f0eC (C:)
dfrigqgydvhqlvpgrpliiggvtipyergllgdadvllhaitdalfgaaalgdigrhf
dsrallrecasrvaqagfairnvdstiiaqapklaphidamraniaadldlpldrvnvka
ktneklgylgrgegieaqaaalvvr