PDB entry 3ezk

View 3ezk on RCSB PDB site
Description: bacteriophage t4 gp17 motor assembly based on crystal structures and cryo-em reconstructions
Deposited on 2008-10-23, released 2009-01-13
The last revision was dated 2018-07-18, with a file datestamp of 2018-07-13.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA packaging protein Gp17
    Species: Bacteriophage T4 [TaxId:10665]
    Gene: 17
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA packaging protein Gp17
    Species: Bacteriophage T4 [TaxId:10665]
    Gene: 17
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA packaging protein Gp17
    Species: Bacteriophage T4 [TaxId:10665]
    Gene: 17
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: DNA packaging protein Gp17
    Species: Bacteriophage T4 [TaxId:10665]
    Gene: 17
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA packaging protein Gp17
    Species: Bacteriophage T4 [TaxId:10665]
    Gene: 17
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ezkA (A:)
meqpinvlndfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhk
ivkipnnsdkpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyf
aetycaithidygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcf
nkdkavgilahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayass
pdavrgnsfamiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwta
avegksgfepytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegts
gtlisgmklavmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtd
dvweqvgvlhsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvi
cdsytdlgmkqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyh
ddlvmslvifgwlstqskfidyadkddmrlasevfsk

    Sequence, based on observed residues (ATOM records):
    >3ezkA (A:)
dfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhkivkipnnsd
kpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyfaetycaith
idygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcfnkdkavgil
ahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayasspdavrgnsf
amiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwtaavegksgfe
pytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegtsgtlisgmkl
avmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtddvweqvgvl
hsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvicdsytdlgm
kqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyhddlvmslvi
fgwlstqskfidy

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ezkB (B:)
meqpinvlndfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhk
ivkipnnsdkpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyf
aetycaithidygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcf
nkdkavgilahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayass
pdavrgnsfamiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwta
avegksgfepytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegts
gtlisgmklavmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtd
dvweqvgvlhsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvi
cdsytdlgmkqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyh
ddlvmslvifgwlstqskfidyadkddmrlasevfsk

    Sequence, based on observed residues (ATOM records):
    >3ezkB (B:)
dfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhkivkipnnsd
kpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyfaetycaith
idygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcfnkdkavgil
ahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayasspdavrgnsf
amiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwtaavegksgfe
pytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegtsgtlisgmkl
avmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtddvweqvgvl
hsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvicdsytdlgm
kqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyhddlvmslvi
fgwlstqskfidy

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3ezkC (C:)
meqpinvlndfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhk
ivkipnnsdkpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyf
aetycaithidygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcf
nkdkavgilahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayass
pdavrgnsfamiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwta
avegksgfepytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegts
gtlisgmklavmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtd
dvweqvgvlhsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvi
cdsytdlgmkqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyh
ddlvmslvifgwlstqskfidyadkddmrlasevfsk

    Sequence, based on observed residues (ATOM records):
    >3ezkC (C:)
dfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhkivkipnnsd
kpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyfaetycaith
idygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcfnkdkavgil
ahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayasspdavrgnsf
amiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwtaavegksgfe
pytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegtsgtlisgmkl
avmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtddvweqvgvl
hsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvicdsytdlgm
kqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyhddlvmslvi
fgwlstqskfidy

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3ezkD (D:)
meqpinvlndfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhk
ivkipnnsdkpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyf
aetycaithidygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcf
nkdkavgilahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayass
pdavrgnsfamiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwta
avegksgfepytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegts
gtlisgmklavmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtd
dvweqvgvlhsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvi
cdsytdlgmkqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyh
ddlvmslvifgwlstqskfidyadkddmrlasevfsk

    Sequence, based on observed residues (ATOM records):
    >3ezkD (D:)
dfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhkivkipnnsd
kpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyfaetycaith
idygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcfnkdkavgil
ahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayasspdavrgnsf
amiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwtaavegksgfe
pytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegtsgtlisgmkl
avmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtddvweqvgvl
hsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvicdsytdlgm
kqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyhddlvmslvi
fgwlstqskfidy

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3ezkE (E:)
meqpinvlndfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhk
ivkipnnsdkpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyf
aetycaithidygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcf
nkdkavgilahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayass
pdavrgnsfamiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwta
avegksgfepytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegts
gtlisgmklavmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtd
dvweqvgvlhsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvi
cdsytdlgmkqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyh
ddlvmslvifgwlstqskfidyadkddmrlasevfsk

    Sequence, based on observed residues (ATOM records):
    >3ezkE (E:)
dfhplneagkilikhpslaerkdedgihwiksqwdgkwypekfsdylrlhkivkipnnsd
kpelfqtykdknnkrsrymglpnlkraniktqwtremveewkkcrddivyfaetycaith
idygvikvqlrdyqrdmlkimsskrmtvcnlsrqlgkttvvaiflahfvcfnkdkavgil
ahkgsmsaevldrtkqaiellpdflqpgivewnkgsieldngssigayasspdavrgnsf
amiyidecafipnfhdswlaiqpvissgrrskiiitttpnglnhfydiwtaavegksgfe
pytaiwnsvkerlyndedifddgwqwsiqtingsslaqfrqehtaafegtsgtlisgmkl
avmdfievtpddhgfhqfkkpepdrkyiatldcsegrgqdyhalhiidvtddvweqvgvl
hsntishlilpdivmrylveynecpvyielnstgvsvakslymdleyegvicdsytdlgm
kqtkrtkavgcstlkdliekdkliihhratiqefrtfsekgvswaaeegyhddlvmslvi
fgwlstqskfidy