PDB entry 3eyo

View 3eyo on RCSB PDB site
Description: Crystal structure of anti-human cytomegalovirus antibody 8F9
Class: immune system
Keywords: Human cytomegalovirus, antibody, Immunoglobulin domain, IMMUNE SYSTEM
Deposited on 2008-10-21, released 2008-12-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2008-12-16, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.241
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 8f9 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3EYO (1-End)
    Domains in SCOPe 2.08: d3eyoa1, d3eyoa2
  • Chain 'B':
    Compound: ad-2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3EYO (0-End)
    Domains in SCOPe 2.08: d3eyob_
  • Chain 'C':
    Compound: 8f9 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3EYO (1-End)
    Domains in SCOPe 2.08: d3eyoc1, d3eyoc2
  • Chain 'D':
    Compound: ad-2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3EYO (0-End)
    Domains in SCOPe 2.08: d3eyod_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3eyoA (A:)
meivltqspatlslspgeratlscrasqsvggyltwyqhkpgqaprllifdasiratgip
arfsgsgsgtdftltitrlepedfavyycqqrsmwppvtfgqgtkleikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >3eyoA (A:)
eivltqspatlslspgeratlscrasqsvggyltwyqhkpgqaprllifdasiratgipa
rfsgsgsgtdftltitrlepedfavyycqqrsmwppvtfgqgtkleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3eyoB (B:)
qvrlvesgggvvqpggslrlscegsgfkfgdhgihwvrqapgeglqwltvissdgtdery
tdsvkgrftisrdnskntmslqmnnlrpedmglyycardgkcgggrcysglldywgqgtm
vtvssasfkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpa
vlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtglehhhh
hh

    Sequence, based on observed residues (ATOM records): (download) 
    >3eyoB (B:)
qvrlvesgggvvqpggslrlscegsgfkfgdhgihwvrqapgeglqwltvissdgtdery
tdsvkgrftisrdnskntmslqmnnlrpedmglyycardgkysglldywgqgtmvtvssa
sfkgpsvfplapstaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssv
vtvpssslgtqtyicnvnhkpsntkvdkkvep

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3eyoC (C:)
meivltqspatlslspgeratlscrasqsvggyltwyqhkpgqaprllifdasiratgip
arfsgsgsgtdftltitrlepedfavyycqqrsmwppvtfgqgtkleikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >3eyoC (C:)
eivltqspatlslspgeratlscrasqsvggyltwyqhkpgqaprllifdasiratgipa
rfsgsgsgtdftltitrlepedfavyycqqrsmwppvtfgqgtkleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3eyoD (D:)
qvrlvesgggvvqpggslrlscegsgfkfgdhgihwvrqapgeglqwltvissdgtdery
tdsvkgrftisrdnskntmslqmnnlrpedmglyycardgkcgggrcysglldywgqgtm
vtvssasfkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpa
vlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtglehhhh
hh

    Sequence, based on observed residues (ATOM records): (download) 
    >3eyoD (D:)
qvrlvesgggvvqpggslrlscegsgfkfgdhgihwvrqapgeglqwltvissdgtdery
tdsvkgrftisrdnskntmslqmnnlrpedmglyycardgkcgggrcysglldywgqgtm
vtvssasfkgpsvfplapstaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep