PDB entry 3ey1

View 3ey1 on RCSB PDB site
Description: A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
Class: hydrolase/DNA
Keywords: RNase H-DNA COMPLEX, PROTEIN-DNA COMPLEX, ENDONUCLEASE, 2'-THIOMETHYL URIDINE RIBONUCLEIC ACID, Hydrolase, Magnesium, Manganese, Metal-binding, Nuclease, HYDROLASE-DNA COMPLEX
Deposited on 2008-10-17, released 2009-04-28
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonuclease H
    Species: Bacillus halodurans [TaxId:86665]
    Gene: rnhA, BH0863
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KEI9 (0-End)
      • engineered (73)
    Domains in SCOPe 2.07: d3ey1a_
  • Chain 'B':
    Compound: 5'-d(*cp*gp*cp*gp*ap*ap*(usm)p*(usm)p*cp*gp*cp*g)-3'
    Species: synthetic, synthetic
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ey1A (A:)
akeeiiweslsvdvgsqgnpgiveykgvdtktgevlferepipigtnnmgeflaivhglr
ylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpi
lkwqtdkwgeikadygrk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ey1A (A:)
akeeiiweslsvdvgsqgnpgiveykgvdtktgevlferepipigtnnmgeflaivhglr
ylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpi
lkwqtdkwgeikadygr

  • Chain 'B':
    No sequence available.