PDB entry 3evf
View 3evf on RCSB PDB site
Description: Crystal structure of Me7-GpppA complex of yellow fever virus methyltransferase and S-adenosyl-L-homocysteine
Class: transferase
Keywords: yellow fever virus, NS5 methyltransferase, RNA cap binding, ATP-binding, Capsid protein, Cleavage on pair of basic residues, Endoplasmic reticulum, Envelope protein, Glycoprotein, Helicase, Hydrolase, Membrane, Metal-binding, Multifunctional enzyme, Nucleotide-binding, Nucleotidyltransferase, Nucleus, Phosphoprotein, Protease, Ribonucleoprotein, RNA replication, RNA-binding, RNA-directed RNA polymerase, Secreted, Serine protease, Transmembrane, Viral nucleoprotein, Virion, TRANSFERASE
Deposited on
2008-10-13, released
2009-01-06
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.207
AEROSPACI score: 0.63
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: RNA-directed RNA polymerase NS5
Species: Yellow fever virus [TaxId:11090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3evfa_ - Heterogens: GTA, SAH, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3evfA (A:)
mgsangktlgevwkrelnlldkrqfelykrtdivevdrdtarrhlaegkvdtgvavsrgt
aklrwfhergyvklegrvidlgcgrggwcyyaaaqkevsgvkgftlgrdghekpmnvqsl
gwniitfkdktdihrlepvkcdtllcdigesssssvtegertvrvldtvekwlacgvdnf
cvkvlapympdvleklellqrrfggtvirnplsrnsthemyyvsgarsnvtftvnqtsrl
lmrrmrrptgkvtleadvilpigtrsvgssshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3evfA (A:)
ktlgevwkrelnlldkrqfelykrtdivevdrdtarrhlaegkvdtgvavsrgtaklrwf
hergyvklegrvidlgcgrggwcyyaaaqkevsgvkgftlgrdghekpmnvqslgwniit
fkdktdihrlepvkcdtllcdigesssssvtegertvrvldtvekwlacgvdnfcvkvla
pympdvleklellqrrfggtvirnplsrnsthemyyvsgarsnvtftvnqtsrllmrrmr
rptgkvtleadvilpigtrsv