PDB entry 3err

View 3err on RCSB PDB site
Description: microtubule binding domain from mouse cytoplasmic dynein as a fusion with seryl-trna synthetase
Deposited on 2008-10-03, released 2008-11-25
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 2.27 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA synthetase from Thermus thermophilus
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JHU4 (34-201)
      • expression tag (0-33)
      • engineered mutation (97)
      • engineered mutation (161)
      • expression tag (528-535)
    • Uniprot P34945 (202-527)
      • expression tag (0-33)
      • engineered mutation (97)
      • engineered mutation (161)
      • expression tag (528-535)
  • Chain 'B':
    Compound: fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA synthetase from Thermus thermophilus
    Species: Thermus thermophilus [TaxId:262724]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JHU4 (34-201)
      • expression tag (0-33)
      • engineered mutation (97)
      • engineered mutation (161)
      • expression tag (528-535)
    • Uniprot P34945 (202-527)
      • expression tag (0-33)
      • engineered mutation (97)
      • engineered mutation (161)
      • expression tag (528-535)
  • Heterogens: AMP, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3errA (A:)
mvdlkrlrqepevfhrairekgvaldleallavdeqlhkqqeviadkqmsvkedldkvep
avieaqnavksikkqhlvevrsmanppaavklalesialllgesttdwkqirsiimrenf
iptivnfsaeeisdairekmkknymsnpsynyeivnraslaagpmvkwaiaqlnyadmlk
rveplrnelqkleddakdnqqklealllqvplppwpgapvggeeanreikrvggppefsf
ppldhvalmekngwweprisqvsgsrsyalkgdlalyelallrfamdfmarrgflpmtlp
syarekaflgtghfpayrdqvwaiaetdlyltgtaevvlnalhsgeilpyealplryagy
apafrseagsfgkdvrglmrvhqfhkveqyvlteasleasdrafqellenaeeilrllel
pyrlvevatgdmgpgkwrqvdievylpsegryrethscsalldwqarranlryrdpegrv
ryaytlnntalatprilamllenhqlqdgrvrvpqalipymgkevlepgahhhhhh

    Sequence, based on observed residues (ATOM records):
    >3errA (A:)
dlkrlrqepevfhrairekgvaldleallavdeqlhkqqeviadkqmsvkedldkvepav
ieaqnavksikkqhlvevrsmanppaavklalesialllgesttdwkqirsiimrenfip
tivnfsaeeisdairekmkknymsnpsynyeivnraslaagpmvkwaiaqlnyadmlkrv
eplrnelqkleddakdnqqklealllqvplppwpgapvggeeanreikrvggppefsfpp
ldhvalmekngwweprisqvsgsrsyalkgdlalyelallrfamdfmarrgflpmtlpsy
arekaflgtghfpayrdqvwaiaetdlyltgtaevvlnalhsgeilpyealplryagyap
afrseagsfgkdvrglmrvhqfhkveqyvlteasleasdrafqellenaeeilrllelpy
rlvevatgdmgpgkwrqvdievylpsegryrethscsalldwqarranlryrdpegrvry
aytlnntalatprilamllenhqlqdgrvrvpqalipymgkevlepg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3errB (B:)
mvdlkrlrqepevfhrairekgvaldleallavdeqlhkqqeviadkqmsvkedldkvep
avieaqnavksikkqhlvevrsmanppaavklalesialllgesttdwkqirsiimrenf
iptivnfsaeeisdairekmkknymsnpsynyeivnraslaagpmvkwaiaqlnyadmlk
rveplrnelqkleddakdnqqklealllqvplppwpgapvggeeanreikrvggppefsf
ppldhvalmekngwweprisqvsgsrsyalkgdlalyelallrfamdfmarrgflpmtlp
syarekaflgtghfpayrdqvwaiaetdlyltgtaevvlnalhsgeilpyealplryagy
apafrseagsfgkdvrglmrvhqfhkveqyvlteasleasdrafqellenaeeilrllel
pyrlvevatgdmgpgkwrqvdievylpsegryrethscsalldwqarranlryrdpegrv
ryaytlnntalatprilamllenhqlqdgrvrvpqalipymgkevlepgahhhhhh

    Sequence, based on observed residues (ATOM records):
    >3errB (B:)
dlkrlrqepevfhrairekgvaldleallavdeqlhkqqeviadkqmsvkedldkvepav
ieaqnavksikkqhlvevrsmanppaavklalesialllgesttdwkqirsiimrenfip
tivnfsaeeisdairekmkknymsnpsynyeivnraslaagpmvkwaiaqlnyadmlkrv
eplrnelqkleddakdnqqklealllqvplppwpgapvggeeanreikrvggppefsfpp
ldhvalmekngwweprisqvsgsrsyalkgdlalyelallrfamdfmarrgflpmtlpsy
arekaflgtghfpayrdqvwaiaetdlyltgtaevvlnalhsgeilpyealplryagyap
afrseagsfgkdvrglmrvhqfhkveqyvlteasleasdrafqellenaeeilrllelpy
rlvevatgdmgpgkwrqvdievylpsegryrethscsalldwqarranlryrdpegrvry
aytlnntalatprilamllenhqlqdgrvrvpqalipymgkevlepg