PDB entry 3em0

View 3em0 on RCSB PDB site
Description: Crystal structure of Zebrafish Ileal Bile Acid-Bindin Protein complexed with cholic acid (crystal form B).
Class: lipid binding protein
Keywords: Ileal bile acid-binding protein, zebrafish (Danio rerio), cholic acid, Lipid-binding, Transport, LIPID BINDING PROTEIN
Deposited on 2008-09-23, released 2009-01-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.227
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ileal bile acid-binding protein
    Species: Danio rerio [TaxId:7955]
    Gene: fabp6, zgc:92421
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6IMW5 (4-133)
      • expression tag (3)
    Domains in SCOPe 2.08: d3em0a1, d3em0a2
  • Chain 'B':
    Compound: Ileal bile acid-binding protein
    Species: Danio rerio [TaxId:7955]
    Gene: fabp6, zgc:92421
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6IMW5 (4-133)
      • expression tag (3)
      • expression tag (134-137)
    Domains in SCOPe 2.08: d3em0b1, d3em0b2, d3em0b3
  • Heterogens: CHD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3em0A (A:)
mrgsafngkwetesqegyepfckligipddviakgrdfklvteivqngddftwtqyypnn
hvvtnkfivgkesdmetvggkkfkgivsmeggkltisfpkyqqtteisggklvetstasg
aqgtavlvrtskkvlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >3em0A (A:)
safngkwetesqegyepfckligipddviakgrdfklvteivqngddftwtqyypnnhvv
tnkfivgkesdmetvggkkfkgivsmeggkltisfpkyqqtteisggklvetstasgaqg
tavlvrtskkv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3em0B (B:)
mrgsafngkwetesqegyepfckligipddviakgrdfklvteivqngddftwtqyypnn
hvvtnkfivgkesdmetvggkkfkgivsmeggkltisfpkyqqtteisggklvetstasg
aqgtavlvrtskkvlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >3em0B (B:)
safngkwetesqegyepfckligipddviakgrdfklvteivqngddftwtqyypnnhvv
tnkfivgkesdmetvggkkfkgivsmeggkltisfpkyqqtteisggklvetstasgaqg
tavlvrtskkvlvpr