PDB entry 3ekt
View 3ekt on RCSB PDB site
Description: Crystal Structure of the inhibitor Darunavir (DRV) in complex with a multi-drug resistant HIV-1 protease variant (L10F/G48V/I54V/V64I/V82A) (Refer: FLAP+ in citation.)
Class: hydrolase
Keywords: HIV-1, protease, multi-drug resistance, Darunavir, AIDS, HYDROLASE
Deposited on
2008-09-19, released
2009-09-01
The last revision prior to the SCOPe 2.04 freeze date was dated
2012-10-17, with a file datestamp of
2012-10-12.
Experiment type: XRAY
Resolution: 1.97 Å
R-factor: 0.211
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Protease
Species: HIV-1 M:B_ARV2/SF2 [TaxId:11685]
Gene: gag-pol
Database cross-references and differences (RAF-indexed):
- Uniprot P03369 (0-98)
- engineered (6)
- engineered (9)
- engineered (47)
- engineered (53)
- engineered (63)
- engineered (81)
Domains in SCOPe 2.04: d3ekta_ - Chain 'B':
Compound: Protease
Species: HIV-1 M:B_ARV2/SF2 [TaxId:11685]
Gene: gag-pol
Database cross-references and differences (RAF-indexed):
- Uniprot P03369 (0-98)
- engineered (6)
- engineered (9)
- engineered (47)
- engineered (53)
- engineered (63)
- engineered (81)
Domains in SCOPe 2.04: d3ektb_ - Chain 'C':
Compound: Protease
Species: HIV-1 M:B_ARV2/SF2 [TaxId:11685]
Gene: gag-pol
Database cross-references and differences (RAF-indexed):
- Uniprot P03369 (0-98)
- engineered (6)
- engineered (9)
- engineered (47)
- engineered (53)
- engineered (63)
- engineered (81)
Domains in SCOPe 2.04: d3ektc_ - Chain 'D':
Compound: Protease
Species: HIV-1 M:B_ARV2/SF2 [TaxId:11685]
Gene: gag-pol
Database cross-references and differences (RAF-indexed):
- Uniprot P03369 (0-98)
- engineered (6)
- engineered (9)
- engineered (47)
- engineered (53)
- engineered (63)
- engineered (81)
Domains in SCOPe 2.04: d3ektd_ - Heterogens: ACT, 017, PO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3ektA (A:)
pqitlwkrpivtiriggqlkealldtgaddtvleemnlpgkwkpkmivgiggfvkvrqyd
qipieicghkaigtvlvgptpaniigrnlltqigctlnf
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3ektB (B:)
pqitlwkrpivtiriggqlkealldtgaddtvleemnlpgkwkpkmivgiggfvkvrqyd
qipieicghkaigtvlvgptpaniigrnlltqigctlnf
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3ektC (C:)
pqitlwkrpivtiriggqlkealldtgaddtvleemnlpgkwkpkmivgiggfvkvrqyd
qipieicghkaigtvlvgptpaniigrnlltqigctlnf
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3ektD (D:)
pqitlwkrpivtiriggqlkealldtgaddtvleemnlpgkwkpkmivgiggfvkvrqyd
qipieicghkaigtvlvgptpaniigrnlltqigctlnf