PDB entry 3ejl

View 3ejl on RCSB PDB site
Description: replacement of val3 in human thymidylate synthase affects its kinetic properties and intracellular stability
Deposited on 2008-09-18, released 2010-03-02
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thymidylate synthase
    Species: Homo sapiens [TaxId:9606]
    Gene: OK/SW-cl.29, TS, TYMS
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04818 (0-312)
      • engineered mutation (2)
  • Chain 'B':
    Compound: Thymidylate synthase
    Species: Homo sapiens [TaxId:9606]
    Gene: OK/SW-cl.29, TS, TYMS
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04818 (0-312)
      • engineered mutation (2)
  • Chain 'C':
    Compound: Thymidylate synthase
    Species: Homo sapiens [TaxId:9606]
    Gene: OK/SW-cl.29, TS, TYMS
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04818 (0-312)
      • engineered mutation (2)
  • Chain 'D':
    Compound: Thymidylate synthase
    Species: Homo sapiens [TaxId:9606]
    Gene: OK/SW-cl.29, TS, TYMS
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04818 (0-312)
      • engineered mutation (2)
  • Heterogens: PO4, UFP, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ejlA (A:)
    mpfagselprrplppaaqerdaeprpphgelqylgqiqhilrcgvrkddrtgtgtlsvfg
    mqaryslrdefpllttkrvfwkgvleellwfikgstnakelsskgvkiwdangsrdflds
    lgfstreegdlgpvygfqwrhfgaeyrdmesdysgqgvdqlqrvidtiktnpddrriimc
    awnprdlplmalppchalcqfyvvnselscqlyqrsgdmglgvpfniasyalltymiahi
    tglkpgdfihtlgdahiylnhieplkiqlqreprpfpklrilrkvekiddfkaedfqieg
    ynphptikmemav
    

    Sequence, based on observed residues (ATOM records):
    >3ejlA (A:)
    pphgelqylgqiqhilrcgvrkddrtgtgtlsvfgmqaryslrdefpllttkrvfwkgvl
    eellwfikgstnakelsskgvkiwdangsrdfldslgfstreegdlgpvygfqwrhfgae
    yrdmesdysgqgvdqlqrvidtiktnpddrriimcawnprdlplmalppchalcqfyvvn
    selscqlyqrsgdmglgvpfniasyalltymiahitglkpgdfihtlgdahiylnhiepl
    kiqlqreprpfpklrilrkvekiddfkaedfqiegynphptik
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ejlB (B:)
    mpfagselprrplppaaqerdaeprpphgelqylgqiqhilrcgvrkddrtgtgtlsvfg
    mqaryslrdefpllttkrvfwkgvleellwfikgstnakelsskgvkiwdangsrdflds
    lgfstreegdlgpvygfqwrhfgaeyrdmesdysgqgvdqlqrvidtiktnpddrriimc
    awnprdlplmalppchalcqfyvvnselscqlyqrsgdmglgvpfniasyalltymiahi
    tglkpgdfihtlgdahiylnhieplkiqlqreprpfpklrilrkvekiddfkaedfqieg
    ynphptikmemav
    

    Sequence, based on observed residues (ATOM records):
    >3ejlB (B:)
    pphgelqylgqiqhilrcgvrkddrtgtgtlsvfgmqaryslrdefpllttkrvfwkgvl
    eellwfikgstnakelsskgvkiwdangsrdfldslgfstreegdlgpvygfqwrhfgae
    yrdmesdysgqgvdqlqrvidtiktnpddrriimcawnprdlplmalppchalcqfyvvn
    selscqlyqrsgdmglgvpfniasyalltymiahitglkpgdfihtlgdahiylnhiepl
    kiqlqreprpfpklrilrkvekiddfkaedfqiegynphptik
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3ejlC (C:)
    mpfagselprrplppaaqerdaeprpphgelqylgqiqhilrcgvrkddrtgtgtlsvfg
    mqaryslrdefpllttkrvfwkgvleellwfikgstnakelsskgvkiwdangsrdflds
    lgfstreegdlgpvygfqwrhfgaeyrdmesdysgqgvdqlqrvidtiktnpddrriimc
    awnprdlplmalppchalcqfyvvnselscqlyqrsgdmglgvpfniasyalltymiahi
    tglkpgdfihtlgdahiylnhieplkiqlqreprpfpklrilrkvekiddfkaedfqieg
    ynphptikmemav
    

    Sequence, based on observed residues (ATOM records):
    >3ejlC (C:)
    pphgelqylgqiqhilrcgvrkddrtgtgtlsvfgmqaryslrdefpllttkrvfwkgvl
    eellwfikgstnakelsskgvkiwdangsrdfldslgfstreegdlgpvygfqwrhfgae
    yrdmesdysgqgvdqlqrvidtiktnpddrriimcawnprdlplmalppchalcqfyvvn
    selscqlyqrsgdmglgvpfniasyalltymiahitglkpgdfihtlgdahiylnhiepl
    kiqlqreprpfpklrilrkvekiddfkaedfqiegynphptik
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3ejlD (D:)
    mpfagselprrplppaaqerdaeprpphgelqylgqiqhilrcgvrkddrtgtgtlsvfg
    mqaryslrdefpllttkrvfwkgvleellwfikgstnakelsskgvkiwdangsrdflds
    lgfstreegdlgpvygfqwrhfgaeyrdmesdysgqgvdqlqrvidtiktnpddrriimc
    awnprdlplmalppchalcqfyvvnselscqlyqrsgdmglgvpfniasyalltymiahi
    tglkpgdfihtlgdahiylnhieplkiqlqreprpfpklrilrkvekiddfkaedfqieg
    ynphptikmemav
    

    Sequence, based on observed residues (ATOM records):
    >3ejlD (D:)
    pphgelqylgqiqhilrcgvrkddrtgtgtlsvfgmqaryslrdefpllttkrvfwkgvl
    eellwfikgstnakelsskgvkiwdangsrdfldslgfstreegdlgpvygfqwrhfgae
    yrdmesdysgqgvdqlqrvidtiktnpddrriimcawnprdlplmalppchalcqfyvvn
    selscqlyqrsgdmglgvpfniasyalltymiahitglkpgdfihtlgdahiylnhiepl
    kiqlqreprpfpklrilrkvekiddfkaedfqiegynphptik