PDB entry 3ei4

View 3ei4 on RCSB PDB site
Description: structure of the hsddb1-hsddb2 complex
Deposited on 2008-09-15, released 2009-01-20
The last revision was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA damage-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: DDB1, XAP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q16531 (18-1157)
      • see remark 999 (439)
      • see remark 999 (915-916)
  • Chain 'B':
    Compound: DNA damage-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: DDB2
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA damage-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: DDB1, XAP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q16531 (18-1157)
      • see remark 999 (439)
      • see remark 999 (915-916)
  • Chain 'D':
    Compound: DNA damage-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: DDB2
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA damage-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: DDB1, XAP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q16531 (18-1157)
      • see remark 999 (439)
      • see remark 999 (915-916)
  • Chain 'F':
    Compound: DNA damage-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: DDB2
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ei4A (A:)
mhhhhhhrrlvprgsggrmsynyvvtaqkptavngcvtghftsaedlnlliakntrleiy
vvtaeglrpvkevgmygkiavmelfrpkgeskdllfiltakynacileykqsgesidiit
rahgnvqdrigrpsetgiigiidpecrmiglrlydglfkvipldrdnkelkafnirleel
hvidvkflygcqapticfvyqdpqgrhvktyevslrekefnkgpwkqenveaeasmviav
pepfggaiiigqesityhngdkylaiappiikqstivchnrvdpngsryllgdmegrlfm
lllekeeqmdgtvtlkdlrvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsne
qgsyvvametftnlgpivdmcvvdlerqgqgqlvtcsgafkegslriirngigihehasi
dlpgikglwplrsdpnretydtlvlsfvgqtrvlmlngeeveetelmgfvddqqtffcgn
vahqqliqitsasvrlvsqepkalvsewkepqaknisvascnssqvvvavgralyylqih
pqelrqishtemehevaclditplgdsnglsplcaiglwtdisarilklpsfellhkeml
ggeiiprsilmttfesshyllcalgdgalfyfglnietgllsdrkkvtlgtqptvlrtfr
slsttnvfacsdrptviyssnhklvfsnvnlkevnymcplnsdgypdslalannstltig
tideiqklhirtvplyesprkicyqevsqcfgvlssrievqdtsggttalrpsastqals
ssvsssklfssstaphetsfgeevevhnlliidqhtfevlhahqflqneyalslvscklg
kdpntyfivgtamvypeeaepkqgrivvfqysdgklqtvaekevkgavysmvefngklla
sinstvrlyewttekdvrtecnhynnimalylktkgdfilvgdlmrsvlllaykpmegnf
eeiardfnpnwmsaveildddnflgaenafnlfvcqkdsaattdeerqhlqevglfhlge
fvnvfchgslvmqnlgetstptqgsvlfgtvngmiglvtslseswynllldmqnrlnkvi
ksvgkiehsfwrsfhterktepatgfidgdliesfldisrpkmqevvanlqyddgsgmkr
eataddlikvveeltrih

    Sequence, based on observed residues (ATOM records):
    >3ei4A (A:)
msynyvvtaqkptavngcvtghftsaedlnlliakntrleiyvvtaeglrpvkevgmygk
iavmelfrpkgeskdllfiltakynacileykqsgesidiitrahgnvqdrigrpsetgi
igiidpecrmiglrlydglfkvipldrdnkelkafnirleelhvidvkflygcqapticf
vyqdpqgrhvktyevslrekefnkgpwkqenveaeasmviavpepfggaiiigqesityh
ngdkylaiappiikqstivchnrvdpngsryllgdmegrlfmlllekeeqmdgtvtlkdl
rvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsneqgsyvvametftnlgpiv
dmcvvdlerqgqgqlvtcsgafkegslriirngigihehasidlpgikglwplrsdpnre
tydtlvlsfvgqtrvlmlngeeveetelmgfvddqqtffcgnvahqqliqitsasvrlvs
qepkalvsewkepqaknisvascnssqvvvavgralyylqihpqelrqishtemehevac
lditplgdsnglsplcaiglwtdisarilklpsfellhkemlggeiiprsilmttfessh
yllcalgdgalfyfglnietgllsdrkkvtlgtqptvlrtfrslsttnvfacsdrptviy
ssnhklvfsnvnlkevnymcplnsdgypdslalannstltigtideiqklhirtvplyes
prkicyqevsqcfgvlssrievqdtsggttalrpsastqalsssvsssklfssstaphet
sfgeevevhnlliidqhtfevlhahqflqneyalslvscklgkdpntyfivgtamvypee
aepkqgrivvfqysdgklqtvaekevkgavysmvefngkllasinstvrlyewttekdvr
tecnhynnimalylktkgdfilvgdlmrsvlllaykpmegnfeeiardfnpnwmsaveil
dddnflgaenafnlfvcqkdsaattdeerqhlqevglfhlgefvnvfchgslvmqnlget
stptqgsvlfgtvngmiglvtslseswynllldmqnrlnkviksvgkiehsfwrsfhter
ktepatgfidgdliesfldisrpkmqevvanlqyddgsgmkreataddlikvveeltrih

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ei4B (B:)
mhhhhhhrrlvprgsggrqktseivlrprnkrsrsplelepeakklcakgsgpsrrcdsd
clwvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfd
rratslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnq
fyassmegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmd
gkelwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpv
naacfspdgarllttdqkseirvysasqwdcplgliphphrhfqhltpikaawhprynli
vvgrypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasam
gyhiliwsqeeartrk

    Sequence, based on observed residues (ATOM records):
    >3ei4B (B:)
wvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfdrr
atslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnqfy
assmegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmdgk
elwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpvna
acfspdgarllttdqkseirvysasqwdcplgliphphrhfqhltpikaawhprynlivv
grypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasamgy
hiliwsqe

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3ei4C (C:)
mhhhhhhrrlvprgsggrmsynyvvtaqkptavngcvtghftsaedlnlliakntrleiy
vvtaeglrpvkevgmygkiavmelfrpkgeskdllfiltakynacileykqsgesidiit
rahgnvqdrigrpsetgiigiidpecrmiglrlydglfkvipldrdnkelkafnirleel
hvidvkflygcqapticfvyqdpqgrhvktyevslrekefnkgpwkqenveaeasmviav
pepfggaiiigqesityhngdkylaiappiikqstivchnrvdpngsryllgdmegrlfm
lllekeeqmdgtvtlkdlrvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsne
qgsyvvametftnlgpivdmcvvdlerqgqgqlvtcsgafkegslriirngigihehasi
dlpgikglwplrsdpnretydtlvlsfvgqtrvlmlngeeveetelmgfvddqqtffcgn
vahqqliqitsasvrlvsqepkalvsewkepqaknisvascnssqvvvavgralyylqih
pqelrqishtemehevaclditplgdsnglsplcaiglwtdisarilklpsfellhkeml
ggeiiprsilmttfesshyllcalgdgalfyfglnietgllsdrkkvtlgtqptvlrtfr
slsttnvfacsdrptviyssnhklvfsnvnlkevnymcplnsdgypdslalannstltig
tideiqklhirtvplyesprkicyqevsqcfgvlssrievqdtsggttalrpsastqals
ssvsssklfssstaphetsfgeevevhnlliidqhtfevlhahqflqneyalslvscklg
kdpntyfivgtamvypeeaepkqgrivvfqysdgklqtvaekevkgavysmvefngklla
sinstvrlyewttekdvrtecnhynnimalylktkgdfilvgdlmrsvlllaykpmegnf
eeiardfnpnwmsaveildddnflgaenafnlfvcqkdsaattdeerqhlqevglfhlge
fvnvfchgslvmqnlgetstptqgsvlfgtvngmiglvtslseswynllldmqnrlnkvi
ksvgkiehsfwrsfhterktepatgfidgdliesfldisrpkmqevvanlqyddgsgmkr
eataddlikvveeltrih

    Sequence, based on observed residues (ATOM records):
    >3ei4C (C:)
msynyvvtaqkptavngcvtghftsaedlnlliakntrleiyvvtaeglrpvkevgmygk
iavmelfrpkgeskdllfiltakynacileykqsgesidiitrahgnvqdrigrpsetgi
igiidpecrmiglrlydglfkvipldrdnkelkafnirleelhvidvkflygcqapticf
vyqdpqgrhvktyevslrekefnkgpwkqenveaeasmviavpepfggaiiigqesityh
ngdkylaiappiikqstivchnrvdpngsryllgdmegrlfmlllekeeqmdgtvtlkdl
rvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsneqgsyvvametftnlgpiv
dmcvvdlerqgqgqlvtcsgafkegslriirngigihehasidlpgikglwplrsdpnre
tydtlvlsfvgqtrvlmlngeeveetelmgfvddqqtffcgnvahqqliqitsasvrlvs
qepkalvsewkepqaknisvascnssqvvvavgralyylqihpqelrqishtemehevac
lditplgdsnglsplcaiglwtdisarilklpsfellhkemlggeiiprsilmttfessh
yllcalgdgalfyfglnietgllsdrkkvtlgtqptvlrtfrslsttnvfacsdrptviy
ssnhklvfsnvnlkevnymcplnsdgypdslalannstltigtideiqklhirtvplyes
prkicyqevsqcfgvlssrievqdtsggttalrpsastqalsssvsssklfssstaphet
sfgeevevhnlliidqhtfevlhahqflqneyalslvscklgkdpntyfivgtamvypee
aepkqgrivvfqysdgklqtvaekevkgavysmvefngkllasinstvrlyewttekdvr
tecnhynnimalylktkgdfilvgdlmrsvlllaykpmegnfeeiardfnpnwmsaveil
dddnflgaenafnlfvcqkdsaattdeerqhlqevglfhlgefvnvfchgslvmqnlget
stptqgsvlfgtvngmiglvtslseswynllldmqnrlnkviksvgkiehsfwrsfhter
ktepatgfidgdliesfldisrpkmqevvanlqyddgsgmkreataddlikvveeltrih

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3ei4D (D:)
mhhhhhhrrlvprgsggrqktseivlrprnkrsrsplelepeakklcakgsgpsrrcdsd
clwvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfd
rratslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnq
fyassmegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmd
gkelwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpv
naacfspdgarllttdqkseirvysasqwdcplgliphphrhfqhltpikaawhprynli
vvgrypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasam
gyhiliwsqeeartrk

    Sequence, based on observed residues (ATOM records):
    >3ei4D (D:)
wvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfdrr
atslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnqfy
assmegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmdgk
elwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpvna
acfspdgarllttdqkseirvysasqwdcplgliphphrhfqhltpikaawhprynlivv
grypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasamgy
hiliwsqe

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3ei4E (E:)
mhhhhhhrrlvprgsggrmsynyvvtaqkptavngcvtghftsaedlnlliakntrleiy
vvtaeglrpvkevgmygkiavmelfrpkgeskdllfiltakynacileykqsgesidiit
rahgnvqdrigrpsetgiigiidpecrmiglrlydglfkvipldrdnkelkafnirleel
hvidvkflygcqapticfvyqdpqgrhvktyevslrekefnkgpwkqenveaeasmviav
pepfggaiiigqesityhngdkylaiappiikqstivchnrvdpngsryllgdmegrlfm
lllekeeqmdgtvtlkdlrvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsne
qgsyvvametftnlgpivdmcvvdlerqgqgqlvtcsgafkegslriirngigihehasi
dlpgikglwplrsdpnretydtlvlsfvgqtrvlmlngeeveetelmgfvddqqtffcgn
vahqqliqitsasvrlvsqepkalvsewkepqaknisvascnssqvvvavgralyylqih
pqelrqishtemehevaclditplgdsnglsplcaiglwtdisarilklpsfellhkeml
ggeiiprsilmttfesshyllcalgdgalfyfglnietgllsdrkkvtlgtqptvlrtfr
slsttnvfacsdrptviyssnhklvfsnvnlkevnymcplnsdgypdslalannstltig
tideiqklhirtvplyesprkicyqevsqcfgvlssrievqdtsggttalrpsastqals
ssvsssklfssstaphetsfgeevevhnlliidqhtfevlhahqflqneyalslvscklg
kdpntyfivgtamvypeeaepkqgrivvfqysdgklqtvaekevkgavysmvefngklla
sinstvrlyewttekdvrtecnhynnimalylktkgdfilvgdlmrsvlllaykpmegnf
eeiardfnpnwmsaveildddnflgaenafnlfvcqkdsaattdeerqhlqevglfhlge
fvnvfchgslvmqnlgetstptqgsvlfgtvngmiglvtslseswynllldmqnrlnkvi
ksvgkiehsfwrsfhterktepatgfidgdliesfldisrpkmqevvanlqyddgsgmkr
eataddlikvveeltrih

    Sequence, based on observed residues (ATOM records):
    >3ei4E (E:)
msynyvvtaqkptavngcvtghftsaedlnlliakntrleiyvvtaeglrpvkevgmygk
iavmelfrpkgeskdllfiltakynacileykqsgesidiitrahgnvqdrigrpsetgi
igiidpecrmiglrlydglfkvipldrdnkelkafnirleelhvidvkflygcqapticf
vyqdpqgrhvktyevslrekefnkgpwkqenveaeasmviavpepfggaiiigqesityh
ngdkylaiappiikqstivchnrvdpngsryllgdmegrlfmlllekeeqmdgtvtlkdl
rvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsneqgsyvvametftnlgpiv
dmcvvdlerqgqgqlvtcsgafkegslriirngigihehasidlpgikglwplrsdpnre
tydtlvlsfvgqtrvlmlngeeveetelmgfvddqqtffcgnvahqqliqitsasvrlvs
qepkalvsewkepqaknisvascnssqvvvavgralyylqihpqelrqishtemehevac
lditplgdsnglsplcaiglwtdisarilklpsfellhkemlggeiiprsilmttfessh
yllcalgdgalfyfglnietgllsdrkkvtlgtqptvlrtfrslsttnvfacsdrptviy
ssnhklvfsnvnlkevnymcplnsdgypdslalannstltigtideiqklhirtvplyes
prkicyqevsqcfgvlssrievqdtsggttalrpsastqalsssvsssklfssstaphet
sfgeevevhnlliidqhtfevlhahqflqneyalslvscklgkdpntyfivgtamvypee
aepkqgrivvfqysdgklqtvaekevkgavysmvefngkllasinstvrlyewttekdvr
tecnhynnimalylktkgdfilvgdlmrsvlllaykpmegnfeeiardfnpnwmsaveil
dddnflgaenafnlfvcqkdsaattdeerqhlqevglfhlgefvnvfchgslvmqnlget
stptqgsvlfgtvngmiglvtslseswynllldmqnrlnkviksvgkiehsfwrsfhter
ktepatgfidgdliesfldisrpkmqevvanlqyddgsgmkreataddlikvveeltrih

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3ei4F (F:)
mhhhhhhrrlvprgsggrqktseivlrprnkrsrsplelepeakklcakgsgpsrrcdsd
clwvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfd
rratslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnq
fyassmegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmd
gkelwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpv
naacfspdgarllttdqkseirvysasqwdcplgliphphrhfqhltpikaawhprynli
vvgrypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasam
gyhiliwsqeeartrk

    Sequence, based on observed residues (ATOM records):
    >3ei4F (F:)
wvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfdrr
atslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnqfy
assmegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmdgk
elwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpvna
acfspdgarllttdqkseirvysasqwdcplgliphphrhfqhltpikaawhprynlivv
grypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasamgy
hiliwsqe