PDB entry 3ehz

View 3ehz on RCSB PDB site
Description: X-ray structure of the pentameric ligand gated ion channel of Gloebacter violaceus (GLIC) in a presumptive open conformation
Deposited on 2008-09-15, released 2008-11-11
The last revision was dated 2009-08-25, with a file datestamp of 2009-08-21.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.239
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glr4197 protein
    Species: Gloeobacter violaceus [TaxId:33072]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Glr4197 protein
    Species: Gloeobacter violaceus [TaxId:33072]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Glr4197 protein
    Species: Gloeobacter violaceus [TaxId:33072]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Glr4197 protein
    Species: Gloeobacter violaceus [TaxId:33072]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Glr4197 protein
    Species: Gloeobacter violaceus [TaxId:33072]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ehzA (A:)
    gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
    vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
    fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
    eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
    lvetnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
    vvfllaniilaflffgf
    

    Sequence, based on observed residues (ATOM records):
    >3ehzA (A:)
    pppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvktye
    peaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsqtlh
    iylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskldyq
    lrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvetnlp
    ktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfllan
    iilaflffgf
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ehzB (B:)
    gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
    vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
    fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
    eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
    lvetnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
    vvfllaniilaflffgf
    

    Sequence, based on observed residues (ATOM records):
    >3ehzB (B:)
    pppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvktye
    peaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsqtlh
    iylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskldyq
    lrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvetnlp
    ktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfllan
    iilaflffgf
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3ehzC (C:)
    gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
    vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
    fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
    eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
    lvetnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
    vvfllaniilaflffgf
    

    Sequence, based on observed residues (ATOM records):
    >3ehzC (C:)
    pppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvktye
    peaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsqtlh
    iylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskldyq
    lrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvetnlp
    ktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfllan
    iilaflffgf
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3ehzD (D:)
    gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
    vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
    fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
    eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
    lvetnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
    vvfllaniilaflffgf
    

    Sequence, based on observed residues (ATOM records):
    >3ehzD (D:)
    pppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvktye
    peaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsqtlh
    iylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskldyq
    lrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvetnlp
    ktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfllan
    iilaflffgf
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3ehzE (E:)
    gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
    vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
    fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
    eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
    lvetnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
    vvfllaniilaflffgf
    

    Sequence, based on observed residues (ATOM records):
    >3ehzE (E:)
    pppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvktye
    peaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsqtlh
    iylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskldyq
    lrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvetnlp
    ktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfllan
    iilaflffgf