PDB entry 3ehm

View 3ehm on RCSB PDB site
Description: Structure of BT1043
Class: sugar binding protein
Keywords: SusD homolog, glycan binding, mucin O-glycan binding, tetratrico-peptide repeat, SUGAR BINDING PROTEIN
Deposited on 2008-09-13, released 2009-05-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-05-12, with a file datestamp of 2009-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.171
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SusD homolog
    Species: Bacteroides thetaiotaomicron [TaxId:818]
    Gene: BT_1043
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8A8X4
      • conflict (211)
    Domains in SCOPe 2.08: d3ehma_
  • Chain 'B':
    Compound: SusD homolog
    Species: Bacteroides thetaiotaomicron [TaxId:818]
    Gene: BT_1043
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8A8X4
      • conflict (211)
    Domains in SCOPe 2.08: d3ehmb_
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ehmA (A:)
masdyeavntnpygvsdgelgplkygarfmnmqqrvipigspslttgpgndlqntdliss
gnyigyfgnnnnwgfnneanwnftdsrmnyayqnfysqiflpwneiyeiakdsdspseqa
ileianivrniawlratdvfgpiaynsagdgsiapkfdsqevvyrsmladlsksvellnt
isysvmaqydliyngnvqnwvklanslmlrivvrvhfidetlakeyitkaldpknggvie
disseakikssdkmpllnsmlasvneynetrmgatiwgyldgykdprlsayftegtygsg
swaqtgyfpvaptnsksksetsysakfasrpkvdsnsplywfrasetyflkaeaalynli
ggdpktfyeqginisfqeqgvsgvatylsgtgkptgltgsnykygtynhdlsigntspkw
ddytgnlskqeeqlqkiitqkylalypnaveawteyrrtgfpylmkpmdeaapgrigasi
edcrvperfrfaptaynsnpnmaeiptllgggdigatklwwvrsnrpkqpnq

    Sequence, based on observed residues (ATOM records): (download) 
    >3ehmA (A:)
plkygarfmnmqqrvipigspslttgpgndlqntdlissgnyigyfgnnnnwgfnneanw
nftdsrmnyayqnfysqiflpwneiyeiakdsdspseqaileianivrniawlratdvfg
piaynsagdgsiapkfdsqevvyrsmladlsksvellntisysvmaqydliyngnvqnwv
klanslmlrivvrvhfidetlakeyitkaldpknggviedisseakikssdkmpllnsml
asvneynetrmgatiwgyldgykdprlsayftegtygsgswaqtgyfpvaptnskskset
sysakfasrpkvdsnsplywfrasetyflkaeaalynliggdpktfyeqginisfqeqgv
sgvatylsgtgkptgltgsnykygtynhdlsigntspkwddytgnlskqeeqlqkiitqk
ylalypnaveawteyrrtgfpylmkpmdeaapgrigasiedcrvperfrfaptaynsnpn
maeiptllgggdigatklwwvrsnrpkqpn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ehmB (B:)
masdyeavntnpygvsdgelgplkygarfmnmqqrvipigspslttgpgndlqntdliss
gnyigyfgnnnnwgfnneanwnftdsrmnyayqnfysqiflpwneiyeiakdsdspseqa
ileianivrniawlratdvfgpiaynsagdgsiapkfdsqevvyrsmladlsksvellnt
isysvmaqydliyngnvqnwvklanslmlrivvrvhfidetlakeyitkaldpknggvie
disseakikssdkmpllnsmlasvneynetrmgatiwgyldgykdprlsayftegtygsg
swaqtgyfpvaptnsksksetsysakfasrpkvdsnsplywfrasetyflkaeaalynli
ggdpktfyeqginisfqeqgvsgvatylsgtgkptgltgsnykygtynhdlsigntspkw
ddytgnlskqeeqlqkiitqkylalypnaveawteyrrtgfpylmkpmdeaapgrigasi
edcrvperfrfaptaynsnpnmaeiptllgggdigatklwwvrsnrpkqpnq

    Sequence, based on observed residues (ATOM records): (download) 
    >3ehmB (B:)
plkygarfmnmqqrvipigspslttgpgndlqntdlissgnyigyfgnnnnwgfnneanw
nftdsrmnyayqnfysqiflpwneiyeiakdsdspseqaileianivrniawlratdvfg
piaynsagdgsiapkfdsqevvyrsmladlsksvellntisysvmaqydliyngnvqnwv
klanslmlrivvrvhfidetlakeyitkaldpknggviedisseakikssdkmpllnsml
asvneynetrmgatiwgyldgykdprlsayftegtygsgswaqtgyfpvaptnskskset
sysakfasrpkvdsnsplywfrasetyflkaeaalynliggdpktfyeqginisfqeqgv
sgvatylsgtgkptgltgsnykygtynhdlsigntspkwddytgnlskqeeqlqkiitqk
ylalypnaveawteyrrtgfpylmkpmdeaapgrigasiedcrvperfrfaptaynsnpn
maeiptllgggdigatklwwvrsnrpkqpn