PDB entry 3ehk

View 3ehk on RCSB PDB site
Description: Crystal structure of Pru du amandin, an allergenic protein from prunus dulcis
Deposited on 2008-09-13, released 2009-09-15
The last revision was dated 2009-09-15, with a file datestamp of 2009-09-11.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.257
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Prunin
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Prunin
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Prunin
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Prunin
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Prunin
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Prunin
    Species: Prunus dulcis [TaxId:3755]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ehkA (A:)
arqsqlspqnqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrngl
hlpsysnapqliyivqgrgvlgavfsgcpetfeesqqssqqgrqqeqeqerqqqqqgeqg
rqqgqqeqqqerqgrqqgrqqqeegrqqeqqqgqqgrpqqqqqfrqldrhqktrriregd
vvaipagvaywsyndgdqelvavnlfhvssdhnqldqnprkfylagnpenefnqqgqsqp
rqqgeqgrpgqhqqpfgrprqqeqqgngnnvfsgfntqllaqalnvneetarnlqgqndn
rnqiiqvrgnldfvqpprgrqereheerqqeqlqqerqqqgeqlmangleetfcslrlke
nignperadifspragristlnshnlpilrflrlsaergffyrngiysphwnvnahsvvy
virgnarvqvvnengdaildqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafin
tlagrtsflralpdevlanayqisreqarqlkynrqetialsssqqrravv

    Sequence, based on observed residues (ATOM records):
    >3ehkA (A:)
nqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrnglhlpsysnap
qliyivqgrgvlgavfsgcpetfeesqldrhqktrriregdvvaipagvaywsyndgdqe
lvavnlfhvssdhnqldqnprkfylagnpenefnqqgqgnnvfsgfntqllaqalnvnee
tarnlqgqndnrnqiiqvrgnldfvqpprleetfcslrlkenignperadifspragris
tlnshnlpilrflrlsaergffyrngiysphwnvnahsvvyvirgnarvqvvnengdail
dqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafintlagrtsflralpdevlan
ayqisreqarqlkynrqetialss

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ehkB (B:)
arqsqlspqnqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrngl
hlpsysnapqliyivqgrgvlgavfsgcpetfeesqqssqqgrqqeqeqerqqqqqgeqg
rqqgqqeqqqerqgrqqgrqqqeegrqqeqqqgqqgrpqqqqqfrqldrhqktrriregd
vvaipagvaywsyndgdqelvavnlfhvssdhnqldqnprkfylagnpenefnqqgqsqp
rqqgeqgrpgqhqqpfgrprqqeqqgngnnvfsgfntqllaqalnvneetarnlqgqndn
rnqiiqvrgnldfvqpprgrqereheerqqeqlqqerqqqgeqlmangleetfcslrlke
nignperadifspragristlnshnlpilrflrlsaergffyrngiysphwnvnahsvvy
virgnarvqvvnengdaildqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafin
tlagrtsflralpdevlanayqisreqarqlkynrqetialsssqqrravv

    Sequence, based on observed residues (ATOM records):
    >3ehkB (B:)
nqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrnglhlpsysnap
qliyivqgrgvlgavfsgcpetfeesqldrhqktrriregdvvaipagvaywsyndgdqe
lvavnlfhvssdhnqldqnprkfylagnpenefnqqgqgnnvfsgfntqllaqalnvnee
tarnlqgqndnrnqiiqvrgnldfvqpprleetfcslrlkenignperadifspragris
tlnshnlpilrflrlsaergffyrngiysphwnvnahsvvyvirgnarvqvvnengdail
dqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafintlagrtsflralpdevlan
ayqisreqarqlkynrqetialss

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3ehkC (C:)
arqsqlspqnqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrngl
hlpsysnapqliyivqgrgvlgavfsgcpetfeesqqssqqgrqqeqeqerqqqqqgeqg
rqqgqqeqqqerqgrqqgrqqqeegrqqeqqqgqqgrpqqqqqfrqldrhqktrriregd
vvaipagvaywsyndgdqelvavnlfhvssdhnqldqnprkfylagnpenefnqqgqsqp
rqqgeqgrpgqhqqpfgrprqqeqqgngnnvfsgfntqllaqalnvneetarnlqgqndn
rnqiiqvrgnldfvqpprgrqereheerqqeqlqqerqqqgeqlmangleetfcslrlke
nignperadifspragristlnshnlpilrflrlsaergffyrngiysphwnvnahsvvy
virgnarvqvvnengdaildqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafin
tlagrtsflralpdevlanayqisreqarqlkynrqetialsssqqrravv

    Sequence, based on observed residues (ATOM records):
    >3ehkC (C:)
nqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrnglhlpsysnap
qliyivqgrgvlgavfsgcpetfeesqldrhqktrriregdvvaipagvaywsyndgdqe
lvavnlfhvssdhnqldqnprkfylagnpenefnqqgqgnnvfsgfntqllaqalnvnee
tarnlqgqndnrnqiiqvrgnldfvqpprleetfcslrlkenignperadifspragris
tlnshnlpilrflrlsaergffyrngiysphwnvnahsvvyvirgnarvqvvnengdail
dqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafintlagrtsflralpdevlan
ayqisreqarqlkynrqetialss

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3ehkD (D:)
arqsqlspqnqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrngl
hlpsysnapqliyivqgrgvlgavfsgcpetfeesqqssqqgrqqeqeqerqqqqqgeqg
rqqgqqeqqqerqgrqqgrqqqeegrqqeqqqgqqgrpqqqqqfrqldrhqktrriregd
vvaipagvaywsyndgdqelvavnlfhvssdhnqldqnprkfylagnpenefnqqgqsqp
rqqgeqgrpgqhqqpfgrprqqeqqgngnnvfsgfntqllaqalnvneetarnlqgqndn
rnqiiqvrgnldfvqpprgrqereheerqqeqlqqerqqqgeqlmangleetfcslrlke
nignperadifspragristlnshnlpilrflrlsaergffyrngiysphwnvnahsvvy
virgnarvqvvnengdaildqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafin
tlagrtsflralpdevlanayqisreqarqlkynrqetialsssqqrravv

    Sequence, based on observed residues (ATOM records):
    >3ehkD (D:)
nqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrnglhlpsysnap
qliyivqgrgvlgavfsgcpetfeesqldrhqktrriregdvvaipagvaywsyndgdqe
lvavnlfhvssdhnqldqnprkfylagnpenefnqqgqgnnvfsgfntqllaqalnvnee
tarnlqgqndnrnqiiqvrgnldfvqpprleetfcslrlkenignperadifspragris
tlnshnlpilrflrlsaergffyrngiysphwnvnahsvvyvirgnarvqvvnengdail
dqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafintlagrtsflralpdevlan
ayqisreqarqlkynrqetialss

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3ehkE (E:)
arqsqlspqnqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrngl
hlpsysnapqliyivqgrgvlgavfsgcpetfeesqqssqqgrqqeqeqerqqqqqgeqg
rqqgqqeqqqerqgrqqgrqqqeegrqqeqqqgqqgrpqqqqqfrqldrhqktrriregd
vvaipagvaywsyndgdqelvavnlfhvssdhnqldqnprkfylagnpenefnqqgqsqp
rqqgeqgrpgqhqqpfgrprqqeqqgngnnvfsgfntqllaqalnvneetarnlqgqndn
rnqiiqvrgnldfvqpprgrqereheerqqeqlqqerqqqgeqlmangleetfcslrlke
nignperadifspragristlnshnlpilrflrlsaergffyrngiysphwnvnahsvvy
virgnarvqvvnengdaildqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafin
tlagrtsflralpdevlanayqisreqarqlkynrqetialsssqqrravv

    Sequence, based on observed residues (ATOM records):
    >3ehkE (E:)
nqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrnglhlpsysnap
qliyivqgrgvlgavfsgcpetfeesqldrhqktrriregdvvaipagvaywsyndgdqe
lvavnlfhvssdhnqldqnprkfylagnpenefnqqgqgnnvfsgfntqllaqalnvnee
tarnlqgqndnrnqiiqvrgnldfvqpprleetfcslrlkenignperadifspragris
tlnshnlpilrflrlsaergffyrngiysphwnvnahsvvyvirgnarvqvvnengdail
dqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafintlagrtsflralpdevlan
ayqisreqarqlkynrqetialss

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3ehkF (F:)
arqsqlspqnqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrngl
hlpsysnapqliyivqgrgvlgavfsgcpetfeesqqssqqgrqqeqeqerqqqqqgeqg
rqqgqqeqqqerqgrqqgrqqqeegrqqeqqqgqqgrpqqqqqfrqldrhqktrriregd
vvaipagvaywsyndgdqelvavnlfhvssdhnqldqnprkfylagnpenefnqqgqsqp
rqqgeqgrpgqhqqpfgrprqqeqqgngnnvfsgfntqllaqalnvneetarnlqgqndn
rnqiiqvrgnldfvqpprgrqereheerqqeqlqqerqqqgeqlmangleetfcslrlke
nignperadifspragristlnshnlpilrflrlsaergffyrngiysphwnvnahsvvy
virgnarvqvvnengdaildqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafin
tlagrtsflralpdevlanayqisreqarqlkynrqetialsssqqrravv

    Sequence, based on observed residues (ATOM records):
    >3ehkF (F:)
nqcqlnqlqarepdnriqaeagqietwnfnqgdfqcagvaasritiqrnglhlpsysnap
qliyivqgrgvlgavfsgcpetfeesqldrhqktrriregdvvaipagvaywsyndgdqe
lvavnlfhvssdhnqldqnprkfylagnpenefnqqgqgnnvfsgfntqllaqalnvnee
tarnlqgqndnrnqiiqvrgnldfvqpprleetfcslrlkenignperadifspragris
tlnshnlpilrflrlsaergffyrngiysphwnvnahsvvyvirgnarvqvvnengdail
dqevqqgqlfivpqnhgviqqagnqgfeyfafkteenafintlagrtsflralpdevlan
ayqisreqarqlkynrqetialss