PDB entry 3eg9

View 3eg9 on RCSB PDB site
Description: Crystal structure of the mammalian COPII-coat protein Sec23/24 bound to the transport signal sequence of membrin
Deposited on 2008-09-10, released 2008-10-21
The last revision was dated 2014-04-16, with a file datestamp of 2014-04-11.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.202
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein transport protein Sec23A
    Species: Homo sapiens [TaxId:9606]
    Gene: SEC23A
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: SEC24 related gene family, member D
    Species: Homo sapiens [TaxId:9606]
    Gene: SEC24D
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8IYI7 (3-769)
      • expression tag (0-2)
  • Chain 'C':
    Compound: peptide
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3EG9 (0-End)
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3eg9A (A:)
mttylefiqqneerdgvrfswnvwpssrleatrmvvpvaalftplkerpdlppiqyepvl
csrttcravlnplcqvdyraklwacnfcyqrnqfppsyagiselnqpaellpqfssieyv
vlrgpqmpliflyvvdtcmededlqalkesmqmslsllpptalvglitfgrmvqvhelgc
egisksyvfrgtkdlsakqlqemlglskvpltqatrgpqvqqpppsnrflqpvqkidmnl
tdllgelqrdpwpvpqgkrplrssgvalsiavgllectfpntgarimmfiggpatqgpgm
vvgdelktpirswhdidkdnakyvkkgtkhfealanraattghvidiyacaldqtgllem
kccpnltggymvmgdsfntslfkqtfqrvftkdmhgqfkmgfggtleiktsreikisgai
gpcvslnskgpcvseneigtggtcqwkicglsptttlaiyfevvnqhnapipqggrgaiq
fvtqyqhssgqrrirvttiarnwadaqtqiqniaasfdqeaaailmarlaiyraeteegp
dvlrwldrqlirlcqkfgeyhkddpssfrfsetfslypqfmfhlrrssflqvfnnspdes
syyrhhfmrqdltqslimiqpilyaysfsgppepvlldsssiladrillmdtffqiliyh
getiaqwrksgyqdmpeyenfrhllqapvddaqeilhsrfpmpryidtehggsqarflls
kvnpsqthnnmyawgqesgapiltddvslqvfmdhlkklavssa

    Sequence, based on observed residues (ATOM records):
    >3eg9A (A:)
tylefiqqneerdgvrfswnvwpssrleatrmvvpvaalftplkerpdlppiqyepvlcs
rttcravlnplcqvdyraklwacnfcyqrnqfppsyagiselnqpaellpqfssieyvvl
rgpqmpliflyvvdtcmededlqalkesmqmslsllpptalvglitfgrmvqvhelgceg
isksyvfrgtkdlsakqlqemlglskvsnrflqpvqkidmnltdllgelqrdpwpvpqgk
rplrssgvalsiavgllectfpntgarimmfiggpatqgpgmvvgdelktpirswhdidk
dnakyvkkgtkhfealanraattghvidiyacaldqtgllemkccpnltggymvmgdsfn
tslfkqtfqrvftkdmhgqfkmgfggtleiktsreikisgaigpcvslnskgpcvsenei
gtggtcqwkicglsptttlaiyfevvnqhnapipqggrgaiqfvtqyqhssgqrrirvtt
iarnwadaqtqiqniaasfdqeaaailmarlaiyraeteegpdvlrwldrqlirlcqkfg
eyhkddpssfrfsetfslypqfmfhlrrssflqvfnnspdessyyrhhfmrqdltqslim
iqpilyaysfsgppepvlldsssiladrillmdtffqiliyhgetiaqwrksgyqdmpey
enfrhllqapvddaqeilhsrfpmpryidtehggsqarfllskvpiltddvslqvfmdhl
kklavs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3eg9B (B:)
amgspiqviendrasrggqvyatntrgqipplvttdcmiqdqgnasprfircttycfpct
sdmakqaqiplaavikpfatipsnesplylvnhgesgpvrcnrckaymcpfmqfieggrr
yqcgfcncvndvppfyfqhldhigrrldhyekpelslgsyeyvatldycrkskppnppaf
ifmidvsysniknglvkliceelktmlekipkeeqeetsairvgfitynkvlhffnvksn
laqpqmmvvtdvgevfvplldgflvnyqesqsvihnlldqipdmfadsnenetvfapviq
agmealkaadcpgklfifhsslptaeapgklknrddkklvntdkekilfqpqtnvydsla
kdcvahgcsvtlflfpsqyvdvaslglvpqltggtlykynnfqmhldrqqflndlrndie
kkigfdaimrvrtstgfratdffggilmnnttdvemaaidcdkavtvefkhddklsedsg
aliqcavlyttisgqrrlrihnlglncssqladlykscetdalinffaksafkavlhqpl
kvireilvnqtahmlacyrkncaspsaasqlilpdsmkvlpvymncllkncvllsrpeis
tderayqrqlvmtmgvadsqlffypqllpihtldvkstmlpaavrcsesrlseegiflla
nglhmflwlgvssppeliqgifnvpsfahintdmtllpevgnpysqqlrmimgiiqqkrp
ysmkltivkqreqpemvfrqflvedkglyggssyvdflccvhkeicqlln

    Sequence, based on observed residues (ATOM records):
    >3eg9B (B:)
amgspiqviendrasrggqvyatntrgqipplvttdcmiqdqgnasprfircttycfpct
sdmakqaqiplaavikpfatipsnesplylvnhgesgpvrcnrckaymcpfmqfieggrr
yqcgfcncvndvppfyfqhldhigrrldhyekpelslgsyeyvatldycrkskppnppaf
ifmidvsysniknglvkliceelktmlekipkeeqeetsairvgfitynkvlhffnvksn
laqpqmmvvtdvgevfvplldgflvnyqesqsvihnlldqipdmfadsnenetvfapviq
agmealkaadcpgklfifhsslptaeapgklknrddkklvntdkekilfqpqtnvydsla
kdcvahgcsvtlflfpsqyvdvaslglvpqltggtlykynnfqmhldrqqflndlrndie
kkigfdaimrvrtstgfratdffggilmnnttdvemaaidcdkavtvefkhddklsedsg
aliqcavlyttisgqrrlrihnlglncssqladlykscetdalinffaksafkavlhqpl
kvireilvnqtahmlacyrkncaspsaasqlilpdsmkvlpvymncllkncvllsrpeis
tderayqrqlvmtmgvadsqlffypqllpihtldvkstmlpaavrcsesrlseegiflla
nglhmflwlgvssppeliqgifnvpsfahintdmtllpevgnpysqqlrmimgiiqqkrp
ysmkltivkqreqpemvfrqflvedkggssyvdflccvhkeicqlln

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3eg9C (C:)
ttipmds

    Sequence, based on observed residues (ATOM records):
    >3eg9C (C:)
ttipmd