PDB entry 3ef5

View 3ef5 on RCSB PDB site
Description: Structure of the RNA pyrophosphohydrolase BdRppH in complex with dGTP
Class: hydrolase
Keywords: Nudix, RNA pyrophosphohydrolase, Hydrolase
Deposited on 2008-09-08, released 2009-03-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable pyrophosphohydrolase
    Species: Bdellovibrio bacteriovorus [TaxId:959]
    Gene: mutT, Bd0714
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ef5a_
  • Chain 'B':
    Compound: Probable pyrophosphohydrolase
    Species: Bdellovibrio bacteriovorus [TaxId:959]
    Gene: mutT, Bd0714
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ef5b_
  • Heterogens: DGT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ef5A (A:)
mtddsaveskqkkskirkghwipvvagflrkdgkilvgqrpennslagqwefpggkieng
etpeealarelneelgieaevgelklacthsygdvgililfyeilywkgeprakhhmmle
wihpeelkhrnipeanrkilhkiykalglewrk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ef5A (A:)
hwipvvagflrkdgkilvgqrpennslagqwefpggkiengetpeealarelneelgiea
evgelklacthsygdvgililfyeilywkgeprakhhmmlewihpeelkhrnipeanrki
lhkiykalglew

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ef5B (B:)
mtddsaveskqkkskirkghwipvvagflrkdgkilvgqrpennslagqwefpggkieng
etpeealarelneelgieaevgelklacthsygdvgililfyeilywkgeprakhhmmle
wihpeelkhrnipeanrkilhkiykalglewrk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ef5B (B:)
hwipvvagflrkdgkilvgqrpeagqwefpggkiengetpeealarelneelgieaevge
lklacthsygdvgililfyeilywkgeprakhhmmlewihpeelkhrnipeanrkilhki
ykalglewr