PDB entry 3ee6

View 3ee6 on RCSB PDB site
Description: crystal structure analysis of tripeptidyl peptidase -i
Deposited on 2008-09-04, released 2008-11-25
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tripeptidyl-peptidase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: CLN2
    Database cross-references and differences (RAF-indexed):
    • Uniprot O14773 (Start-562)
      • expression tag (563)
  • Chain 'B':
    Compound: Tripeptidyl-peptidase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: CLN2
    Database cross-references and differences (RAF-indexed):
    • Uniprot O14773 (Start-562)
      • expression tag (563)
  • Heterogens: NAG, ZN, CL, CA, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ee6A (A:)
mglqacllglfalilsgkcsyspepdqrrtlppgwvslgradpeeelsltfalrqqnver
lselvqavsdpsspqygkyltlenvadlvrpspltlhtvqkwllaagaqkchsvitqdfl
tcwlsirqaelllpgaefhhyvggptethvvrsphpyqlpqalaphvdfvgglhrfppts
slrqrpepqvtgtvglhlgvtpsvirkrynltsqdvgsgtsnnsqacaqfleqyfhdsdl
aqfmrlfggnfahqasvarvvgqqgrgragieasldvqylmsaganistwvysspgrheg
qepflqwlmllsnesalphvhtvsygddedslssayiqrvntelmkaaargltllfasgd
sgagcwsvsgrhqfrptfpasspyvttvggtsfqepflitneivdyisgggfsnvfprps
yqeeavtkflsssphlppssyfnasgraypdvaalsdgywvvsnrvpipwvsgtsastpv
fggilslinehrilsgrpplgflnprlyqqhgaglfdvtrgchescldeevegqgfcsgp
gwdpvtgwgtpnfpallktllnprshhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ee6A (A:)
syspepdqrrtlppgwvslgradpeeelsltfalrqqnverlselvqavsdpsspqygky
ltlenvadlvrpspltlhtvqkwllaagaqkchsvitqdfltcwlsirqaelllpgaefh
hyvggptethvvrsphpyqlpqalaphvdfvgglhrfpptshlgvtpsvirkrynltsqd
vgsgtsnnsqacaqfleqyfhdsdlaqfmrlfggnfahqasvarvvgqqgrgragieasl
dvqylmsaganistwvysspgrhegqepflqwlmllsnesalphvhtvsygddedslssa
yiqrvntelmkaaargltllfasgdsgagcwsvsgrhqfrptfpasspyvttvggtsfqe
pflitneivdyisgggfsnvfprpsyqeeavtkflsssphlppssyfnasgraypdvaal
sdgywvvsnrvpipwvsgtsastpvfggilslinehrilsgrpplgflnprlyqqhgagl
fdvtrgchescldeevegqgfcsgpgwdpvtgwgtpnfpallktllnpr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ee6B (B:)
mglqacllglfalilsgkcsyspepdqrrtlppgwvslgradpeeelsltfalrqqnver
lselvqavsdpsspqygkyltlenvadlvrpspltlhtvqkwllaagaqkchsvitqdfl
tcwlsirqaelllpgaefhhyvggptethvvrsphpyqlpqalaphvdfvgglhrfppts
slrqrpepqvtgtvglhlgvtpsvirkrynltsqdvgsgtsnnsqacaqfleqyfhdsdl
aqfmrlfggnfahqasvarvvgqqgrgragieasldvqylmsaganistwvysspgrheg
qepflqwlmllsnesalphvhtvsygddedslssayiqrvntelmkaaargltllfasgd
sgagcwsvsgrhqfrptfpasspyvttvggtsfqepflitneivdyisgggfsnvfprps
yqeeavtkflsssphlppssyfnasgraypdvaalsdgywvvsnrvpipwvsgtsastpv
fggilslinehrilsgrpplgflnprlyqqhgaglfdvtrgchescldeevegqgfcsgp
gwdpvtgwgtpnfpallktllnprshhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ee6B (B:)
syspepdqrrtlppgwvslgradpeeelsltfalrqqnverlselvqavsdpsspqygky
ltlenvadlvrpspltlhtvqkwllaagaqkchsvitqdfltcwlsirqaelllpgaefh
hyvggptethvvrsphpyqlpqalaphvdfvgglhrfpptshlgvtpsvirkrynltsqd
vgsgtsnnsqacaqfleqyfhdsdlaqfmrlfggnfahqasvarvvgqqgrgragieasl
dvqylmsaganistwvysspgrhegqepflqwlmllsnesalphvhtvsygddedslssa
yiqrvntelmkaaargltllfasgdsgagcwsvsgrhqfrptfpasspyvttvggtsfqe
pflitneivdyisgggfsnvfprpsyqeeavtkflsssphlppssyfnasgraypdvaal
sdgywvvsnrvpipwvsgtsastpvfggilslinehrilsgrpplgflnprlyqqhgagl
fdvtrgchescldeevegqgfcsgpgwdpvtgwgtpnfpallktllnpr