PDB entry 3ebm

View 3ebm on RCSB PDB site
Description: Crystal structure of human translationally controlled tumour associated protein (hTCTP) mutant E12V
Class: calcium-binding protein
Keywords: TCTP, E12V, Calcium, Cytoplasm, Phosphoprotein, CALCIUM-BINDING PROTEIN
Deposited on 2008-08-28, released 2009-06-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-11-10, with a file datestamp of 2009-11-06.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.239
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Translationally-controlled tumor protein
    Species: Homo sapiens [TaxId:9606]
    Gene: TPT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13693 (0-171)
      • engineered (11)
      • expression tag (172-175)
    Domains in SCOPe 2.08: d3ebma1, d3ebma2
  • Chain 'B':
    Compound: Translationally-controlled tumor protein
    Species: Homo sapiens [TaxId:9606]
    Gene: TPT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13693 (0-171)
      • engineered (11)
      • expression tag (172-176)
    Domains in SCOPe 2.08: d3ebmb1, d3ebmb2
  • Chain 'C':
    Compound: Translationally-controlled tumor protein
    Species: Homo sapiens [TaxId:9606]
    Gene: TPT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13693 (0-171)
      • engineered (11)
      • expression tag (172-175)
    Domains in SCOPe 2.08: d3ebmc1, d3ebmc2
  • Chain 'D':
    Compound: Translationally-controlled tumor protein
    Species: Homo sapiens [TaxId:9606]
    Gene: TPT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13693 (0-171)
      • engineered (11)
      • expression tag (172-173)
    Domains in SCOPe 2.08: d3ebmd1, d3ebmd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ebmA (A:)
miiyrdlishdvmfsdiykireiadglclevegkmvsrtegniddsliggnasaegpege
gtestvitgvdivmnhhlqetsftkeaykkyikdymksikgkleeqrpervkpfmtgaae
qikhilanfknyqffigenmnpdgmvalldyredgvtpymiffkdglemekclehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ebmA (A:)
miiyrdlishdvmfsdiykireiadglclevegkmvsitgvdivmnhhlqetsftkeayk
kyikdymksikgkleeqrpervkpfmtgaaeqikhilanfknyqffigenmnpdgmvall
dyredgvtpymiffkdglemekclehh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ebmB (B:)
miiyrdlishdvmfsdiykireiadglclevegkmvsrtegniddsliggnasaegpege
gtestvitgvdivmnhhlqetsftkeaykkyikdymksikgkleeqrpervkpfmtgaae
qikhilanfknyqffigenmnpdgmvalldyredgvtpymiffkdglemekclehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ebmB (B:)
miiyrdlishdvmfsdiykireiadglclevegkmvsrgvdivmnhhlqetsftkeaykk
yikdymksikgkleeqrpervkpfmtgaaeqikhilanfknyqffigenmnpdgmvalld
yredgvtpymiffkdglemekclehhh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3ebmC (C:)
miiyrdlishdvmfsdiykireiadglclevegkmvsrtegniddsliggnasaegpege
gtestvitgvdivmnhhlqetsftkeaykkyikdymksikgkleeqrpervkpfmtgaae
qikhilanfknyqffigenmnpdgmvalldyredgvtpymiffkdglemekclehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ebmC (C:)
miiyrdlishdvmfsdiykireiadglclevegkmvtgvdivmnhhlqetsftkeaykky
ikdymksikgkleeqrpervkpfmtgaaeqikhilanfknyqffigenmnpdgmvalldy
redgvtpymiffkdglemekclehh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ebmD (D:)
miiyrdlishdvmfsdiykireiadglclevegkmvsrtegniddsliggnasaegpege
gtestvitgvdivmnhhlqetsftkeaykkyikdymksikgkleeqrpervkpfmtgaae
qikhilanfknyqffigenmnpdgmvalldyredgvtpymiffkdglemekclehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ebmD (D:)
miiyrdlishdvmfsdiykireiadglclevegkmvstgvdivmnhhlqetsftkeaykk
yikdymksikgkleeqrpervkpfmtgaaeqikhilanfknyqffigenmnpdgmvalld
yredgvtpymiffkdglemekcle