PDB entry 3eag

View 3eag on RCSB PDB site
Description: The crystal structure of UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (MPL) from Neisseria meningitides
Class: ligase
Keywords: Neisseria meningitidis MC58, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, ATP-binding, Ligase, Nucleotide-binding
Deposited on 2008-08-25, released 2008-09-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.186
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
    Species: Neisseria meningitidis MC58 [TaxId:122586]
    Gene: mpl-2, mpl-1, NMB1145, NMB1183
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JRY9 (3-325)
      • expression tag (2)
    Domains in SCOPe 2.08: d3eaga1, d3eaga2, d3eaga3
  • Chain 'B':
    Compound: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
    Species: Neisseria meningitidis MC58 [TaxId:122586]
    Gene: mpl-2, mpl-1, NMB1145, NMB1183
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JRY9 (3-325)
      • expression tag (2)
    Domains in SCOPe 2.08: d3eagb1, d3eagb2, d3eagb3
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3eagA (A:)
snamkhihiigiggtfmgglaaiakeagfevsgcdakmyppmstqlealgidvyegfdaa
qldefkadvyvignvakrgmdvveailnlglpyisgpqwlsenvlhhhwvlgvagthgkt
ttasmlawvleyaglapgfliggvpenfgvsarlpqtprqdpnsqspffvieadeydtaf
fdkrskfvhyrprtavlnnlefdhadifadlgaiqtqfhylvrtvpseglivcngrqqsl
qdtldkgcwtpvekfgtehgwqageanadgsfdvlldgktagrvkwdlmgrhnrmnalav
iaaarhvgvdiqtacealgafknvkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3eagA (A:)
amkhihiigiggtfmgglaaiakeagfevsgcdakmyppmstqlealgidvyegfdaaql
defkadvyvignvakrgmdvveailnlglpyisgpqwlsenvlhhhwvlgvagthgkttt
asmlawvleyaglapgfliggvpenfgvsarlpqtprqdpnsqspffvieadeydtaffd
krskfvhyrprtavlnnlefdhadifadlgaiqtqfhylvrtvpseglivcngrqqslqd
tldkgcwtpvekfgtehgwqageanadgsfdvlldgktagrvkwdlmgrhnrmnalavia
aarhvgvdiqtacealgafknvkr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3eagB (B:)
snamkhihiigiggtfmgglaaiakeagfevsgcdakmyppmstqlealgidvyegfdaa
qldefkadvyvignvakrgmdvveailnlglpyisgpqwlsenvlhhhwvlgvagthgkt
ttasmlawvleyaglapgfliggvpenfgvsarlpqtprqdpnsqspffvieadeydtaf
fdkrskfvhyrprtavlnnlefdhadifadlgaiqtqfhylvrtvpseglivcngrqqsl
qdtldkgcwtpvekfgtehgwqageanadgsfdvlldgktagrvkwdlmgrhnrmnalav
iaaarhvgvdiqtacealgafknvkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3eagB (B:)
amkhihiigiggtfmgglaaiakeagfevsgcdakmyppmstqlealgidvyegfdaaql
defkadvyvignvakrgmdvveailnlglpyisgpqwlsenvlhhhwvlgvagthgkttt
asmlawvleyaglapgfliggvpenfgvsarlpqtprqdpnsqspffvieadeydtaffd
krskfvhyrprtavlnnlefdhadifadlgaiqtqfhylvrtvpseglivcngrqqslqd
tldkgcwtpvekfgtehgwqageanadgsfdvlldgktagrvkwdlmgrhnrmnalavia
aarhvgvdiqtacealgafknvkr