PDB entry 3e9j

View 3e9j on RCSB PDB site
Description: structure of the charge-transfer intermediate of the transmembrane redox catalyst dsbb
Deposited on 2008-08-22, released 2008-11-25
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 3.7 Å
R-factor: 0.339
AEROSPACI score: -0.04 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: Thiol/disulfide oxidoreductase DsbA
    Species: Escherichia coli K12 [TaxId:83333]
    Gene: dsbA, dsf, ppfA, b3860, JW3832
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AEG4 (0-188)
      • engineered mutation (32)
  • Chain 'C':
    Compound: Thiol/disulfide oxidoreductase DsbB
    Species: Escherichia coli K12 [TaxId:83333]
    Gene: dsbB, roxB, ycgA, b1185, JW5182
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6M2 (0-175)
      • engineered mutation (7)
      • engineered mutation (48)
      • expression tag (176-181)
  • Chain 'E':
    Compound: Thiol/disulfide oxidoreductase DsbA
    Species: Escherichia coli K12 [TaxId:83333]
    Gene: dsbA, dsf, ppfA, b3860, JW3832
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AEG4 (0-188)
      • engineered mutation (32)
  • Chain 'F':
    Compound: Thiol/disulfide oxidoreductase DsbB
    Species: Escherichia coli K12 [TaxId:83333]
    Gene: dsbB, roxB, ycgA, b1185, JW5182
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6M2 (0-175)
      • engineered mutation (7)
      • engineered mutation (48)
      • expression tag (176-181)
  • Heterogens: UQ1

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3e9jB (B:)
aqyedgkqyttlekpvagapqvleffsffcphayqfeevlhisdnvkkklpegvkmtkyh
vnfmggdlgkdltqawavamalgvedkvtvplfegvqktqtirsasdirdvfinagikge
eydaawnsfvvkslvaqqekaaadvqlrgvpamfvngkyqlnpqgmdtsnmdvfvqqyad
tvkylsekk

    Sequence, based on observed residues (ATOM records):
    >3e9jB (B:)
aqyedgkqyttlekpvagapqvleffsffcphayqfeevlhisdnvkkklpegvkmtkyh
vnfmggdlgkdltqawavamalgvedkvtvplfegvqktqtirsasdirdvfinagikge
eydaawnsfvvkslvaqqekaaadvqlrgvpamfvngkyqlnpqgmdtsnmdvfvqqyad
tvkylsek

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3e9jC (C:)
mlrflnqasqgrgawllmaftalaleltalwfqhvmllkpcvlciyervalfgvlgaali
gaiapktplryvamviwlysafrgvqltyehtmlqlypspfatcdfmvrfpewlpldkwv
pqvfvasgdcaerqwdflglempqwllgifiaylivavlvvisqpfkakkrdlfgrhhhh
hh

    Sequence, based on observed residues (ATOM records):
    >3e9jC (C:)
awllmaftalaleltalwfqhvmllkpcvlciyervalfgvlgaaligaiapktplryva
mviwlysafrgvqltyehtmlqlypspfatcdfmvrfpewlpldkwvpqvfvampqwllg
ifiaylivavlvvi

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3e9jE (E:)
aqyedgkqyttlekpvagapqvleffsffcphayqfeevlhisdnvkkklpegvkmtkyh
vnfmggdlgkdltqawavamalgvedkvtvplfegvqktqtirsasdirdvfinagikge
eydaawnsfvvkslvaqqekaaadvqlrgvpamfvngkyqlnpqgmdtsnmdvfvqqyad
tvkylsekk

    Sequence, based on observed residues (ATOM records):
    >3e9jE (E:)
aqyedgkqyttlekpvagapqvleffsffcphayqfeevlhisdnvkkklpegvkmtkyh
vnfmggdlgkdltqawavamalgvedkvtvplfegvqktqtirsasdirdvfinagikge
eydaawnsfvvkslvaqqekaaadvqlrgvpamfvngkyqlnpqgmdtsnmdvfvqqyad
tvkylsek

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3e9jF (F:)
mlrflnqasqgrgawllmaftalaleltalwfqhvmllkpcvlciyervalfgvlgaali
gaiapktplryvamviwlysafrgvqltyehtmlqlypspfatcdfmvrfpewlpldkwv
pqvfvasgdcaerqwdflglempqwllgifiaylivavlvvisqpfkakkrdlfgrhhhh
hh

    Sequence, based on observed residues (ATOM records):
    >3e9jF (F:)
awllmaftalaleltalwfqhvmllkpcvlciyervalfgvlgaaligaiapktplryva
mviwlysafrgvqltyehtmlqlypspfatcdfmvrfpewlpldkwvpqvfvampqwllg
ifiaylivavlvvi