PDB entry 3e9a

View 3e9a on RCSB PDB site
Description: Crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Vibrio cholerae O1 biovar eltor str. N16961
Class: transferase
Keywords: 2-dehydro-3-deoxyphosphooctonate aldolase, 3-deoxy-8-phosphooctulonate synthase,Lipopolysaccharide biosynthesis,CSGID, Transferase, Structural Genomics, Center for Structural Genomics of Infectious Diseases
Deposited on 2008-08-21, released 2008-09-16
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.178
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-dehydro-3-deoxyphosphooctonate aldolase
    Species: Vibrio cholerae O1 biovar El tor [TaxId:686]
    Gene: kdsA, VC_2175
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KQ29 (3-285)
      • expression tag (0-1)
      • insertion (2)
    Domains in SCOPe 2.03: d3e9aa_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3e9aA (A:)
snamehkivhvgdipvandkpftlfagmnvlesrdlamqicehyvkvtdklgipyvfkas
fdkanrssvhsyrgpgleegmkifqelketfgvkiitdvhteaqaqpvadvvdviqlpaf
larqtdlveamaktgavinvkkpqfmspgqvgnivekfaecgndkvilcergschgydnl
vvdmlgfgvmkqasngspiifdvthslqmrdpsgaasggrreqtvelakaglatgiaglf
ieahpnpdkarcdgpsalpldklepflaqmkalddliksfahidir

    Sequence, based on observed residues (ATOM records): (download) 
    >3e9aA (A:)
snamehkivhvgdipvandkpftlfagmnvlesrdlamqicehyvkvtdklgipyvfkas
fdkanrssvhsyrgpgleegmkifqelketfgvkiitdvhteaqaqpvadvvdviqlpaf
larqtdlveamaktgavinvkkpqfmspgqvgnivekfaecgndkvilcergschgydnl
vvdmlgfgvmkqasngspiifdvthslqrreqtvelakaglatgiaglfieahpnpdkar
cdgpsalpldklepflaqmkalddliksfahidir