PDB entry 3e7x

View 3e7x on RCSB PDB site
Description: Crystal structure of DLTA: implications for the reaction mechanism of non-ribosomal peptide synthetase (NRPS) adenylation domains
Class: ligase
Keywords: DLTA, NON-RIBOSOMAL PEPTIDE SYNTHETASE, NRPS, ADENYLATION DOMAIN, D-alanylation, D-alanine-Dalanyl, AMP, Cytoplasm, Ligase
Deposited on 2008-08-19, released 2008-09-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2008-12-30, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.179
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-alanine--poly(phosphoribitol) ligase subunit 1
    Species: Bacillus subtilis [TaxId:1423]
    Gene: dltA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P39581 (0-502)
      • expression tag (503-507)
    Domains in SCOPe 2.08: d3e7xa1, d3e7xa2
  • Heterogens: AMP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3e7xA (A:)
mkllhaiqthaetypqtdafrsqgqsltyqelweqsdraaaaiqkrisgekkspilvygh
mephmivsflgsvkaghpyipvdlsipseriakiiessgaellihaaglsidavgqqiqt
vsaeelleneggsvsqdqwvkehetfyiiytsgstgnpkgvqisaanlqsftdwicadfp
vsggkiflnqapfsfdlsvmdlypclqsggtlhcvtkdavnkpkvlfeelkksglnvwts
tpsfvqmclmdpgfsqdllphadtfmfcgevlpvsvakallerfpkakifntygpteatv
avtsveitndvisrseslpvgfakpdmnifimdeegqplpegekgeiviagpsvsrgylg
epeltekaffshegqwayrtgdagfiqdgqifcqgrldfqiklhgyrmeleeiefhvrqs
qyvrsavvipyqpngtveyliaaivpeehefekefqltsaikkelaaslpaymiprkfiy
qdhiqmtangkidrkrigeevlvrshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3e7xA (A:)
mkllhaiqthaetypqtdafrsqgqsltyqelweqsdraaaaiqkrisgekkspilvygh
mephmivsflgsvkaghpyipvdlsipseriakiiessgaellihaaglsidavgqqiqt
vsaeelleneggsvsqdqwvkehetfyiiytsgstgnpkgvqisaanlqsftdwicadfp
vsggkiflnqapfsfdlsvmdlypclqsggtlhcvtkdavnkpkvlfeelkksglnvwts
tpsfvqmclmdpgfsqdllphadtfmfcgevlpvsvakallerfpkakifntygpteatv
avtsveitndvisrseslpvgfakpdmnifimdeegqplpegekgeiviagpsvsrgylg
epeltekaffshegqwayrtgdagfiqdgqifcqgrldfqiklhgyrmeleeiefhvrqs
qyvrsavvipyqpngtveyliaaivpeehefekefqltsaikkelaaslpaymiprkfiy
qdhiqmtangkidrkrigeevlvrshhh