PDB entry 3e6j
View 3e6j on RCSB PDB site
Description: Crystal Structure of Variable Lymphocyte Receptor (VLR) RBC36 in Complex with H-trisaccharide
Class: immune system
Keywords: Variable Lymphocyte Receptors, VLR, Leucine-rich repeat, LRR, Adaptive immunity, Immune system, Sea Lamprey, Jawless fish, Receptor
Deposited on
2008-08-15, released
2008-10-07
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-09.
Experiment type: XRAY
Resolution: 1.67 Å
R-factor: N/A
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Variable lymphocyte receptor diversity region
Species: Petromyzon marinus [TaxId:7757]
Gene: VLR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3e6ja_ - Heterogens: SO4, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3e6jA (A:)
amvhhhhhhsaacpsqcscsgttvdcrskrhasvpagiptnaqilylhdnqitklepgvf
dslinlkelylgsnqlgalpvgvfdsltqltvldlgtnqltvlpsavfdrlvhlkelfmc
cnkltelprgierlthlthlaldqnqlksiphgafdrlsslthaylfgnpwdcecrdimy
lrnwvadhtsiamrwdgkavndpdsakcagtntpvravteastspskcp
Sequence, based on observed residues (ATOM records): (download)
>3e6jA (A:)
aacpsqcscsgttvdcrskrhasvpagiptnaqilylhdnqitklepgvfdslinlkely
lgsnqlgalpvgvfdsltqltvldlgtnqltvlpsavfdrlvhlkelfmccnkltelprg
ierlthlthlaldqnqlksiphgafdrlsslthaylfgnpwdcecrdimylrnwvadhts
iamrwdgkavndpdsakcagtntpvravteastspskcp