PDB entry 3e1p

View 3e1p on RCSB PDB site
Description: Crystal structure of E. coli Bacterioferritin (BFR) in which the Ferroxidase centre is inhibited with ZN(II) and high occupancy iron is bound within the cavity.
Class: metal binding protein
Keywords: bacterioferritin. rhombic dodecahedral superstructure, heme, iron, iron storage, metal-binding, metal binding protein
Deposited on 2008-08-04, released 2009-05-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-05-26, with a file datestamp of 2009-05-22.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.241
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pa_
  • Chain 'B':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pb_
  • Chain 'C':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pc_
  • Chain 'D':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pd_
  • Chain 'E':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pe_
  • Chain 'F':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pf_
  • Chain 'G':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pg_
  • Chain 'H':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1ph_
  • Chain 'I':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pi_
  • Chain 'J':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pj_
  • Chain 'K':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pk_
  • Chain 'L':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1pl_
  • Heterogens: SO4, ZN, FE2, HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pA (A:)
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ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pB (B:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pC (C:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pD (D:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pE (E:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pF (F:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pG (G:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pH (H:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pI (I:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pJ (J:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pK (K:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1pL (L:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg