PDB entry 3e1m

View 3e1m on RCSB PDB site
Description: Crystal structure of E. coli Bacterioferritin (BFR) obtained after soaking APO-BFR crystals for 2.5 minutes in FE2+ (2.5M FE(II)-BFR)
Class: metal binding protein
Keywords: bacterioferritin. rhombic dodecahedral superstructure., heme, iron, iron storage, metal-binding, metal binding protein
Deposited on 2008-08-04, released 2009-05-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-05-26, with a file datestamp of 2009-05-22.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.242
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1ma_
  • Chain 'B':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mb_
  • Chain 'C':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mc_
  • Chain 'D':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1md_
  • Chain 'E':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1me_
  • Chain 'F':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mf_
  • Chain 'G':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mg_
  • Chain 'H':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mh_
  • Chain 'I':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mi_
  • Chain 'J':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mj_
  • Chain 'K':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1mk_
  • Chain 'L':
    Compound: bacterioferritin
    Species: Escherichia coli [TaxId:83333]
    Gene: BFR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3e1ml_
  • Heterogens: SO4, FE2, HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mA (A:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mB (B:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mC (C:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mD (D:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mE (E:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mF (F:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mG (G:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mH (H:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mI (I:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mJ (J:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mK (K:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3e1mL (L:)
mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
ieilrdeeghidwleteldliqkmglqnylqaqireeg