PDB entry 3dxw

View 3dxw on RCSB PDB site
Description: The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae complexed with epsilon caprolactam
Class: isomerase
Keywords: fold-type1, pyridoxal-5'-phosphate dependent racemase, Pyridoxal phosphate, ISOMERASE
Deposited on 2008-07-25, released 2009-07-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.41 Å
R-factor: 0.194
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alpha-amino-epsilon-caprolactam racemase
    Species: Achromobacter obae [TaxId:37486]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dxwa_
  • Chain 'B':
    Compound: Alpha-amino-epsilon-caprolactam racemase
    Species: Achromobacter obae [TaxId:37486]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3dxwb_
  • Heterogens: PLP, ICC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dxwA (A:)
hhhhhhssglvprgshmtkalydrdgaaignlqklrffplaisggrgarlieengrelid
lsgawgaaslgyghpaivaavsaaaanpagatilsasnapavtlaerllasfpgegthki
wfghsgsdaneaayraivkatgrsgviafagayhgctvgsmafsghsvqadaakadglil
lpypdpyrpyrndptgdailtllteklaavpagsigaafiepiqsdgglivppdgflrkf
adicrahgilvvcdevkvglarsgrlhcfehegfvpdilvlgkglggglplsaviapaei
ldcasafamqtlhgnpisaaaglavletidrddlpamaerkgrllrdglselakrhplig
dirgrglacgmelvcdrqsreparaetakliyrayqlglvvyyvgmngnvleftppltit
etdihkaldlldrafselsavsneeiaqfagw

    Sequence, based on observed residues (ATOM records): (download) 
    >3dxwA (A:)
tkalydrdgaaignlqklrffplaisggrgarlieengrelidlsgawgaaslgyghpai
vaavsaaaanpagatilsasnapavtlaerllasfpgegthkiwfghsgsdaneaayrai
vkatgrsgviafagayhgctvgsmafglillpypdpyrpyrndptgdailtllteklaav
pagsigaafiepiqsdgglivppdgflrkfadicrahgilvvcdevkvglarsgrlhcfe
hegfvpdilvlgkglggglplsaviapaeildcasafamqtlhgnpisaaaglavletid
rddlpamaerkgrllrdglselakrhpligdirgrglacgmelvcdrqsreparaetakl
iyrayqlglvvyyvgmngnvleftppltitetdihkaldlldrafselsavsneeiaqfa
gw

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dxwB (B:)
hhhhhhssglvprgshmtkalydrdgaaignlqklrffplaisggrgarlieengrelid
lsgawgaaslgyghpaivaavsaaaanpagatilsasnapavtlaerllasfpgegthki
wfghsgsdaneaayraivkatgrsgviafagayhgctvgsmafsghsvqadaakadglil
lpypdpyrpyrndptgdailtllteklaavpagsigaafiepiqsdgglivppdgflrkf
adicrahgilvvcdevkvglarsgrlhcfehegfvpdilvlgkglggglplsaviapaei
ldcasafamqtlhgnpisaaaglavletidrddlpamaerkgrllrdglselakrhplig
dirgrglacgmelvcdrqsreparaetakliyrayqlglvvyyvgmngnvleftppltit
etdihkaldlldrafselsavsneeiaqfagw

    Sequence, based on observed residues (ATOM records): (download) 
    >3dxwB (B:)
kalydrdgaaignlqklrffplaisggrgarlieengrelidlsgawgaaslgyghpaiv
aavsaaaanpagatilsasnapavtlaerllasfpgegthkiwfghsgsdaneaayraiv
katgrsgviafagayhgctvgsmafsghadglillpypdpyrpyrndptgdailtlltek
laavpagsigaafiepiqsdgglivppdgflrkfadicrahgilvvcdevkvglarsgrl
hcfehegfvpdilvlgkglggglplsaviapaeildcasafamqtlhgnpisaaaglavl
etidrddlpamaerkgrllrdglselakrhpligdirgrglacgmelvcdrqsreparae
takliyrayqlglvvyyvgmngnvleftppltitetdihkaldlldrafselsavsneei
aqfagw