PDB entry 3dwq

View 3dwq on RCSB PDB site
Description: crystal structure of the a-subunit of the ab5 toxin from e. coli with neu5gc-2,3gal-1,3glcnac
Deposited on 2008-07-22, released 2008-11-04
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Subtilase cytotoxin, subunit B
    Species: Escherichia coli [TaxId:562]
    Gene: subB
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Subtilase cytotoxin, subunit B
    Species: Escherichia coli [TaxId:562]
    Gene: subB
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Subtilase cytotoxin, subunit B
    Species: Escherichia coli [TaxId:562]
    Gene: subB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3ZTX8 (0-117)
      • expression tag (118-119)
  • Chain 'D':
    Compound: Subtilase cytotoxin, subunit B
    Species: Escherichia coli [TaxId:562]
    Gene: subB
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Subtilase cytotoxin, subunit B
    Species: Escherichia coli [TaxId:562]
    Gene: subB
    Database cross-references and differences (RAF-indexed):
  • Heterogens: POL, AZI, 1PE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dwqA (A:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkknsle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dwqA (A:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dwqB (B:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkknsle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dwqB (B:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkkn

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3dwqC (C:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkknsle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dwqC (C:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkknsle

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3dwqD (D:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkknsle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dwqD (D:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkkn

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3dwqE (E:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkknsle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dwqE (E:)
ewtgdardgmfsgvvitqfhtgqidnkpyfciegkqsagssisacsmknssvwgasfstl
ynqalyfyttgqpvriyyepgvwtyppfvkaltsnalvglstcttstecfgpdrkk