PDB entry 3dtd

View 3dtd on RCSB PDB site
Description: crystal structure of invasion associated protein b from bartonella henselae
Deposited on 2008-07-14, released 2008-09-09
The last revision was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'B':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167-168)
  • Chain 'C':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167-169)
  • Chain 'D':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'E':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'F':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'G':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'H':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'I':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'J':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'K':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Chain 'L':
    Compound: Invasion-associated protein B
    Species: Bartonella henselae [TaxId:38323]
    Gene: invB, BH01650
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G4Y3 (Start-166)
      • expression tag (167)
  • Heterogens: GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dtdA (A:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdA (A:)
sltetyglwsincgiqkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgilvsk
pvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgeppln
dlfvqlngfsnalnrlialqke

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dtdB (B:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdB (B:)
sltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgil
vskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgep
plndlfvqlngfsnalnrlialqkeg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3dtdC (C:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdC (C:)
sltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgil
vskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgep
plndlfvqlngfsnalnrlialqkegh

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3dtdD (D:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdD (D:)
sltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgil
vskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgep
plndlfvqlngfsnalnrlialqke

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3dtdE (E:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdE (E:)
sltetyglwsincgiqkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgilvs
kpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgeppl
ndlfvqlngfsnalnrlialqke

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3dtdF (F:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdF (F:)
sltetyglwsincgiqkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgilvsk
pvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgeppln
dlfvqlngfsnalnrlialqke

  • Chain 'G':
    Sequence, based on SEQRES records:
    >3dtdG (G:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdG (G:)
sltetyglwsincgiqkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgilvs
kpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgeppl
ndlfvqlngfsnalnrlialqke

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3dtdH (H:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdH (H:)
ssltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgi
lvskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapge
pplndlfvqlngfsnalnrlialqke

  • Chain 'I':
    Sequence, based on SEQRES records:
    >3dtdI (I:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdI (I:)
sltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgil
vskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgep
plndlfvqlngfsnalnrlialqke

  • Chain 'J':
    Sequence, based on SEQRES records:
    >3dtdJ (J:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdJ (J:)
sltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgil
vskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgep
plndlfvqlngfsnalnrlialqke

  • Chain 'K':
    Sequence, based on SEQRES records:
    >3dtdK (K:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdK (K:)
sltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgil
vskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgep
plndlfvqlngfsnalnrlialqke

  • Chain 'L':
    Sequence, based on SEQRES records:
    >3dtdL (L:)
mslsnskstttkdtvatlpngassltetyglwsincgiqegkkvcfmhrqevndqnrvvv
amsvvlnadgvvsgnltvpfgilvskpvrlqvdegkavietgirtcvpagcivpivfdkn
yvaalragkhlklamtiaapgepplndlfvqlngfsnalnrlialqkeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >3dtdL (L:)
sltetyglwsincgiqegkkvcfmhrqevndqnrvvvamsvvlnadgvvsgnltvpfgil
vskpvrlqvdegkavietgirtcvpagcivpivfdknyvaalragkhlklamtiaapgep
plndlfvqlngfsnalnrlialqke